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HQ316603.1__AGG54404.1__CYWG_00120__00120

Bact-Vir

HQ316603.1__AGG54404.1__CYWG_00120__00120

Identity

Accession:
HQ316603 ↗
Kingdom:
phage

Quality

77.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Kyanoviridae› Greenvirus› Cyanophage_S-SSM6b

TaxID: 682651

Cluster

View cluster (9 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 58-107
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19835.7 best SegE_GIY-YIG 46.4 6.10e-12 72.0% 28.5%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wkbA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.55 47.0 2.80e-01 100.0% 72.5%
1qmgA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.54 43.0 2.76e-01 98.0% 49.1%
1vx7X00 3.30.1360.210 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.52 38.0 3.03e-01 82.0% 40.2%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4015759 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.59 43.0 2.90e-01 78.0% 40.0%
4173056 2005.1.1.40 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g 0.58 49.0 3.02e-01 100.0% 81.9%
3510266 2005.1.1.1 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 0.56 44.0 2.63e-01 86.0% 53.0%
5047735 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 40.0 2.95e-01 94.0% 30.9%