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HQ317388.1__AGG91271.1__SWVG_00031__00029
Bact-VirHQ317388.1__AGG91271.1__SWVG_00031__00029
Identity
- Accession:
- HQ317388 ↗
- Kingdom:
- phage
Quality
90.9
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Autographivirales›
Kajamvirus›
Synechococcus_phage_S-RIP1
TaxID: 754041
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-111
Domain cluster:
rep: OR521068.1__WNO26777.1__SEA_GROUNDHOG_91__00090__D91-178
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1uh9A02 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.56 | 40.0 | 3.55e-01 | 74.8% | 99.3% |
| 1bxoA02 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.53 | 39.0 | 3.45e-01 | 77.7% | 99.3% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3942694 | 3489.1.1.1 ↗ | a+b complex topology › ArdA › ArdA › ArdA › ArdA | 0.81 | 67.0 | 5.62e-01 | 100.0% | 54.6% |
| 3167881 | 101.1.2.74 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cnd2 | 0.61 | 38.0 | 3.75e-01 | 100.0% | 58.2% |
| 3188677 | 306.3.1.2 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › Img2 | 0.54 | 27.0 | 3.02e-01 | 91.3% | 58.7% |
| 4348647 | 101.1.2.39 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA | 0.52 | 25.0 | 3.04e-01 | 100.0% | 68.6% |
| 3785110 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 36.0 | 3.33e-01 | 100.0% | 57.0% |
| 5082240 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.50 | 27.0 | 3.08e-01 | 92.2% | 67.5% |