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HQ317390.1__AFK66624.1__COPG_00028__00028
Bact-VirHQ317390.1__AFK66624.1__COPG_00028__00028
Identity
- Accession:
- HQ317390 ↗
- Kingdom:
- phage
Quality
71.1
mean pLDDT
Taxonomy
TaxID: 765765
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-76
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4i43B04 | 3.90.1570.40 | Alpha Beta › Alpha-Beta Complex › tt1808, chain A › Pre-mRNA-processing-splicing factor 8 (Prp8), endonuclease domain | 0.72 | 63.0 | 4.85e-01 | 100.0% | 79.1% |
| 2eo6A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.70 | 48.0 | 4.21e-01 | 71.6% | 67.6% |
| 2kd2A01 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.69 | 48.0 | 4.62e-01 | 90.5% | 64.3% |
| 3ovcA01 | 3.30.200.150 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.68 | 54.0 | 5.55e-01 | 89.2% | 88.7% |
| 4exrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.68 | 51.0 | 5.25e-01 | 100.0% | 84.5% |
| 3en8A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.68 | 60.0 | 5.25e-01 | 100.0% | 95.5% |
| 2qguA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.67 | 58.0 | 5.26e-01 | 97.3% | 97.0% |
| 3u1wA02 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.66 | 47.0 | 4.92e-01 | 91.9% | 83.3% |
| 3fkaB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 56.0 | 4.85e-01 | 100.0% | 92.5% |
| 2oggA01 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.65 | 44.0 | 3.63e-01 | 70.3% | 96.3% |
| 5mu3B00 | 3.40.50.12050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 46.0 | 3.61e-01 | 100.0% | 35.6% |
| 2giaB00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.61 | 45.0 | 3.63e-01 | 78.4% | 39.7% |
| 4g29A00 | 3.10.670.10 | Alpha Beta › Roll › Secreted effector protein ssei fold › Secreted effector protein ssei. | 0.61 | 55.0 | 4.22e-01 | 100.0% | 46.4% |
| 2xglA00 | 3.10.450.300 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › YebF/Colicin-M immunity protein | 0.60 | 53.0 | 4.99e-01 | 100.0% | 93.4% |
| 2nvwA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.60 | 52.0 | 3.86e-01 | 100.0% | 53.4% |
| 2jozA01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.60 | 50.0 | 4.60e-01 | 91.9% | 89.6% |
| 2iecD00 | 3.30.1300.20 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 7,8-dihydroneopterin aldolase (MptD) | 0.59 | 53.0 | 4.52e-01 | 100.0% | 66.7% |
| 2i52B00 | 3.30.1300.20 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 7,8-dihydroneopterin aldolase (MptD) | 0.59 | 51.0 | 4.43e-01 | 100.0% | 62.1% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 40.0 | 4.23e-01 | 93.2% | 86.2% |
| 1xtzA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.57 | 50.0 | 4.81e-01 | 95.9% | 83.3% |
| 4m37A02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.57 | 48.0 | 3.78e-01 | 98.6% | 100.0% |
| 4ccvA00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 49.0 | 4.28e-01 | 98.6% | 78.3% |
| 1ln1A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 46.0 | 3.48e-01 | 95.9% | 54.7% |
| 2wb8A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 44.0 | 3.47e-01 | 86.5% | 82.0% |
| 7csoA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 42.0 | 3.54e-01 | 81.1% | 78.0% |
| 4gw9A02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 46.0 | 4.37e-01 | 97.3% | 89.1% |
| 2e5yA01 | 2.60.15.10 | Mainly Beta › Sandwich › ATP Synthase; domain 1 › F0F1 ATP synthase delta/epsilon subunit, N-terminal | 0.55 | 43.0 | 4.05e-01 | 82.4% | 93.2% |
| 4aghA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.55 | 35.0 | 3.49e-01 | 93.2% | 61.3% |
| 1xn5A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 46.0 | 3.89e-01 | 100.0% | 59.4% |
| 3doaA01 | 2.30.310.10 | Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain | 0.53 | 47.0 | 3.74e-01 | 100.0% | 81.0% |
| 2k6pA00 | 3.10.290.10 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain | 0.53 | 45.0 | 4.33e-01 | 91.9% | 96.4% |
| 2it9A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.52 | 41.0 | 3.54e-01 | 86.5% | 69.2% |
| 6u5vB07 | 3.30.1120.100 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.52 | 45.0 | 3.84e-01 | 100.0% | 62.8% |
| 4perB00 | 3.10.130.10 | Alpha Beta › Roll › P-30 Protein › Ribonuclease A-like domain | 0.52 | 42.0 | 3.85e-01 | 95.9% | 98.2% |
| 2c9wA01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.52 | 47.0 | 4.06e-01 | 100.0% | 67.3% |
| 3ci0J01 | 3.10.610.10 | Alpha Beta › Roll › Pili subunits › GSPII I/J protein-like | 0.51 | 44.0 | 3.98e-01 | 98.6% | 75.0% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.51 | 37.0 | 3.71e-01 | 93.2% | 77.3% |
| 5itqA01 | 3.20.190.10 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal | 0.50 | 42.0 | 3.62e-01 | 100.0% | 91.7% |
| 1gpqB00 | 3.40.1420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme | 0.50 | 42.0 | 3.62e-01 | 97.3% | 63.3% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3310438 | 5.1.4.145 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › TAF1C_beta-prop | 0.72 | 66.0 | 3.96e-01 | 100.0% | 21.5% |
| 5044594 | 809.2.1.0 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like | 0.70 | 61.0 | 5.68e-01 | 97.3% | 77.8% |
| 3812208 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.69 | 63.0 | 3.84e-01 | 100.0% | 22.8% |
| 4884256 | 2008.1.1.216 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › U6-snRNA_bdg, PRP8_domainIV | 0.69 | 61.0 | 4.37e-01 | 100.0% | 60.4% |
| 3479716 | 3459.1.1.0 ↗ | beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule | 0.68 | 47.0 | 4.52e-01 | 89.2% | 63.5% |
| 5006481 | 243.1.1.125 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF763 | 0.66 | 56.0 | 4.32e-01 | 100.0% | 41.2% |
| 3587082 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.66 | 46.0 | 5.17e-01 | 83.8% | 98.1% |
| 3645476 | 295.1.1.1 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 | 0.66 | 42.0 | 3.87e-01 | 91.9% | 49.0% |
| 3714344 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.64 | 57.0 | 3.43e-01 | 98.6% | 18.6% |
| 3929144 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.64 | 43.0 | 2.75e-01 | 93.2% | 13.8% |
| 3167877 | 5.1.4.32 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N | 0.64 | 57.0 | 3.36e-01 | 97.3% | 15.0% |
| 2873129 | 5.1.4.32 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N | 0.63 | 56.0 | 3.29e-01 | 97.3% | 14.9% |
| 4024970 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.63 | 57.0 | 3.47e-01 | 100.0% | 22.3% |
| 3738403 | 5.1.4.32 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N | 0.60 | 53.0 | 3.20e-01 | 97.3% | 17.1% |
| 3782114 | 5.1.4.32 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N | 0.60 | 53.0 | 3.18e-01 | 97.3% | 17.3% |
| 178803 | 243.3.1.9 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › YebF | 0.60 | 53.0 | 4.99e-01 | 100.0% | 93.4% |
| 5052825 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.60 | 43.0 | 3.86e-01 | 100.0% | 53.3% |
| 3972580 | 331.1.1.3 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › AlkA_N | 0.60 | 41.0 | 4.06e-01 | 100.0% | 66.3% |
| 3742761 | 243.1.1.41 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Coa1 | 0.60 | 51.0 | 4.48e-01 | 98.6% | 73.9% |
| 5045717 | 286.1.1.2 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF | 0.59 | 45.0 | 3.73e-01 | 81.1% | 79.2% |
| 4025727 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.59 | 46.0 | 3.80e-01 | 91.9% | 45.7% |
| None | — | 0.58 | 48.0 | 2.78e-01 | 93.2% | 9.4% | |
| 7305 | 283.3.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › MK0786-like › MK0786-like › DHNA | 0.58 | 50.0 | 4.37e-01 | 100.0% | 62.3% |
| 3780130 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.58 | 48.0 | 3.90e-01 | 87.8% | 71.5% |
| 3739492 | 267.1.1.0 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain | 0.58 | 51.0 | 4.22e-01 | 100.0% | 88.9% |
| 3282063 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.58 | 48.0 | 4.14e-01 | 95.9% | 73.6% |
| 3400395 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.56 | 51.0 | 4.32e-01 | 97.3% | 86.1% |
| 4423084 | 3504.3.1.1 ↗ | beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N | 0.55 | 48.0 | 3.77e-01 | 100.0% | 77.6% |
| 3256082 | 220.1.1.153 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TRF2_HOY1 | 0.55 | 44.0 | 3.54e-01 | 87.8% | 53.1% |
| 3387958 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.54 | 44.0 | 3.48e-01 | 89.2% | 67.7% |
| 3926158 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.53 | 48.0 | 3.63e-01 | 100.0% | 84.0% |
| 3580295 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.53 | 44.0 | 3.42e-01 | 94.6% | 69.3% |
| 3351103 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.53 | 43.0 | 3.55e-01 | 90.5% | 68.9% |
| 1298558 | 372.1.1.0 ↗ | a+b complex topology › RNase A-like › RNase A-like › RNase A-like | 0.52 | 42.0 | 3.85e-01 | 95.9% | 98.2% |
| 5070684 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.52 | 40.0 | 3.08e-01 | 87.8% | 84.0% |
| 3870987 | 9.13.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like | 0.52 | 44.0 | 4.12e-01 | 95.9% | 96.8% |
| 3853571 | 9.3.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like | 0.52 | 44.0 | 4.08e-01 | 95.9% | 94.7% |
| 3699767 | 295.1.1.7 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › MRP | 0.51 | 40.0 | 3.25e-01 | 90.5% | 74.5% |
| 4531971 | 216.1.1.2 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C | 0.51 | 45.0 | 3.42e-01 | 100.0% | 42.7% |
| 3933443 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.51 | 44.0 | 4.55e-01 | 95.9% | 98.6% |