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HQ317390.1__AFK66647.1__COPG_00051__00051
Bact-VirHQ317390.1__AFK66647.1__COPG_00051__00051
Identity
- Accession:
- HQ317390 ↗
- Kingdom:
- phage
Quality
41.7
mean pLDDT
Taxonomy
TaxID: 765765
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-77
Domain cluster:
rep: MK552140.1__QBX06685.1__BcepSaruman_272__00272__D8-68
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yu0A01 | 2.10.10.30 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.65 | 42.0 | 4.89e-01 | 90.9% | 100.0% |
| 6pxcA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.61 | 44.0 | 3.99e-01 | 76.6% | 66.3% |
| 4geqB00 | 3.30.160.430 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.59 | 36.0 | 4.06e-01 | 79.2% | 81.0% |
| 2kcdA00 | 3.10.450.250 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › S. aureus uracil DNA glycosylase inhibitor | 0.55 | 42.0 | 3.69e-01 | 84.4% | 80.0% |
| 3vcaA02 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.54 | 40.0 | 3.46e-01 | 77.9% | 76.5% |
| 3gkeA01 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.54 | 39.0 | 3.37e-01 | 79.2% | 70.0% |
| 4u1eI00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 41.0 | 2.75e-01 | 85.7% | 68.5% |
| 3jbtA05 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 40.0 | 2.71e-01 | 85.7% | 76.5% |
| 4bt2A01 | 3.30.1330.80 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 | 0.51 | 34.0 | 3.05e-01 | 70.1% | 46.5% |
| 5ha4A02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.51 | 42.0 | 3.52e-01 | 93.5% | 86.0% |
| 3jb9K01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 39.0 | 2.71e-01 | 87.0% | 58.6% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3397609 | 391.1.2.3 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › SVWC | 0.70 | 39.0 | 3.67e-01 | 79.2% | 45.3% |
| 3528795 | 3761.1.1.0 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related | 0.69 | 40.0 | 4.90e-01 | 71.4% | 97.8% |
| 3623960 | 3105.1.1.4 ↗ | a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › MOLO1 | 0.60 | 45.0 | 3.48e-01 | 79.2% | 75.9% |
| 3938632 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.60 | 42.0 | 3.90e-01 | 74.0% | 61.0% |
| 3930915 | 3105.1.1.4 ↗ | a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › MOLO1 | 0.60 | 43.0 | 3.40e-01 | 76.6% | 72.7% |
| 5041214 | 244.1.1.4 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › DAO | 0.58 | 39.0 | 3.16e-01 | 70.1% | 92.0% |
| 4999472 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.55 | 45.0 | 3.41e-01 | 90.9% | 81.1% |
| 3285639 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.53 | 44.0 | 2.58e-01 | 90.9% | 94.8% |
| 4016748 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 40.0 | 2.54e-01 | 85.7% | 80.7% |
| 4048173 | 286.1.1.1 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase | 0.51 | 41.0 | 3.57e-01 | 90.9% | 56.7% |
| 3849061 | 5.1.5.106 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, Beta-prop_EML_2 | 0.51 | 36.0 | 2.44e-01 | 74.0% | 52.5% |
| None | — | 0.50 | 39.0 | 2.59e-01 | 88.3% | 47.9% |
D2
medium
residues 91-201
D3
medium
residues 266-378