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HQ317390.1__AFK66704.1__COPG_00108__00108
Bact-VirHQ317390.1__AFK66704.1__COPG_00108__00108
Identity
- Accession:
- HQ317390 ↗
- Kingdom:
- phage
Quality
64.9
mean pLDDT
Taxonomy
TaxID: 765765
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-58
D2
high
residues 88-206
Domain cluster:
rep: S2_012_000_R2_scaffold_18_prodigal-single.1__X__X__00396__D11-112
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1oxjA01 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.59 | 32.0 | 4.19e-01 | 90.8% | 100.0% |
| 3aq5A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.59 | 49.0 | 5.01e-01 | 98.3% | 89.7% |
| 2gkmA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.59 | 49.0 | 4.86e-01 | 98.3% | 82.7% |
| 3zdmB00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.59 | 27.0 | 3.78e-01 | 92.4% | 96.0% |
| 1b0bA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.59 | 50.0 | 4.73e-01 | 92.4% | 86.5% |
| 2c0kB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.58 | 51.0 | 4.70e-01 | 94.1% | 84.6% |
| 1dlwA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.58 | 48.0 | 4.87e-01 | 98.3% | 90.5% |
| 1q6aA00 | 1.10.1240.30 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › KaiA/RbsU domain | 0.57 | 42.0 | 4.42e-01 | 80.7% | 85.0% |
| 1urvA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.57 | 49.0 | 4.52e-01 | 94.1% | 83.8% |
| 4asvA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.56 | 27.0 | 3.18e-01 | 90.8% | 63.3% |
| 7zviA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.55 | 45.0 | 4.47e-01 | 88.2% | 86.9% |
| 7bvaA02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.55 | 39.0 | 3.18e-01 | 74.8% | 92.5% |
| 2w9zA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.52 | 39.0 | 3.83e-01 | 89.1% | 70.7% |
| 5bn3A04 | 1.10.1140.10 | Mainly Alpha › Orthogonal Bundle › Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3 › Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3 | 0.52 | 30.0 | 2.93e-01 | 84.9% | 48.9% |
| 4wvaB00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.52 | 40.0 | 2.80e-01 | 83.2% | 88.2% |
| 1xakA00 | 2.60.40.1550 | Mainly Beta › Sandwich › Immunoglobulin-like › SARS coronavirus X4 | 0.51 | 26.0 | 3.13e-01 | 75.6% | 77.9% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5060704 | 371.1.1.5 ↗ | few secondary structure elements › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › DUF1353 | 0.96 | 86.0 | 8.99e-01 | 91.6% | 100.0% |
| 3639852 | 6067.1.1.1 ↗ | alpha arrays › Dimerization domain of Sgt2 › Dimerization domain of Sgt2 › Dimerization domain of Sgt2 › SGTA_dimer | 0.62 | 28.0 | 3.48e-01 | 92.4% | 65.7% |
| 3275 | 106.1.1.1 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Globin | 0.59 | 50.0 | 4.72e-01 | 92.4% | 85.9% |
| 2583874 | 106.1.1.3 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Bac_globin | 0.57 | 48.0 | 4.76e-01 | 94.1% | 84.9% |
| 4288099 | 106.1.1.3 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Bac_globin | 0.57 | 49.0 | 4.79e-01 | 98.3% | 84.5% |
| 988057 | 6067.1.1.1 ↗ | alpha arrays › Dimerization domain of Sgt2 › Dimerization domain of Sgt2 › Dimerization domain of Sgt2 › SGTA_dimer | 0.57 | 27.0 | 3.42e-01 | 92.4% | 75.4% |
| 3955829 | 191.1.1.8 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_33 | 0.56 | 41.0 | 3.77e-01 | 77.3% | 81.2% |
| 5065054 | 603.1.1.238 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Cpn60_TCP1 | 0.54 | 34.0 | 3.67e-01 | 99.2% | 76.8% |
| 3961799 | 321.1.1.0 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase | 0.53 | 48.0 | 3.21e-01 | 100.0% | 83.1% |
| 5029167 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.52 | 43.0 | 3.41e-01 | 90.8% | 73.1% |
| 3495127 | 11.12.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD,Neur_chan_memb | 0.52 | 46.0 | 3.57e-01 | 100.0% | 66.9% |
| 3914452 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.50 | 33.0 | 3.62e-01 | 72.3% | 80.0% |