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HQ317390.1__AFK66721.1__COPG_00125__00125

Bact-Vir

HQ317390.1__AFK66721.1__COPG_00125__00125

Identity

Accession:
HQ317390 ↗
Kingdom:
phage

Quality

70.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Franklinbayvirus› Colwellia_phage_9A

TaxID: 765765

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 16-62
PDB
Domain cluster: rep: JQ015307.1__AEZ66262.1__phiTE_096__00096__D9-54
CATH (74)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5w7zA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.77 46.0 3.40e-01 70.2% 24.8%
4qwoB00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.76 65.0 4.77e-01 100.0% 41.7%
2qq6A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.73 62.0 4.67e-01 100.0% 39.7%
2m7oA00 3.10.450.400 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Uncharacterised protein PF15513, DUF4651 0.73 47.0 4.12e-01 72.3% 44.3%
3jtzA00 3.30.160.390 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain 0.72 60.0 5.11e-01 93.6% 71.4%
2z0qA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.71 54.0 3.86e-01 80.9% 29.7%
2zwaA02 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.71 49.0 2.94e-01 72.3% 25.1%
4c23B01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.70 56.0 3.62e-01 93.6% 28.6%
2ywqA00 3.30.160.100 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like 0.70 59.0 4.94e-01 100.0% 65.9%
1qqgA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.70 58.0 4.62e-01 100.0% 44.7%
3le4A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.70 46.0 4.39e-01 91.5% 58.2%
1okjB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.70 57.0 4.33e-01 100.0% 39.4%
5kolD00 3.90.950.20 Alpha Beta › Alpha-Beta Complex › Maf protein › CinA-like 0.69 57.0 4.01e-01 100.0% 37.2%
2yztA00 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.69 58.0 5.28e-01 100.0% 69.7%
3tfmA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 56.0 4.56e-01 100.0% 46.5%
2yt4A03 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.68 56.0 4.44e-01 100.0% 43.3%
2lezA00 3.30.2450.10 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › Secreted effector protein pipB2 0.68 46.0 3.47e-01 72.3% 32.5%
2lstA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.67 54.0 4.06e-01 95.7% 79.2%
3ml4C01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.67 54.0 4.36e-01 100.0% 43.5%
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.66 53.0 5.02e-01 95.7% 75.4%
2ltrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.65 53.0 4.28e-01 100.0% 58.1%
7r97A02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.65 53.0 4.78e-01 95.7% 76.5%
1maiA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 55.0 4.21e-01 100.0% 48.7%
4oxwA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.65 51.0 4.20e-01 100.0% 84.0%
2a6aB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.65 53.0 4.13e-01 100.0% 41.2%
1faoA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 55.0 4.40e-01 100.0% 49.0%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.65 52.0 4.75e-01 100.0% 88.7%
2i2lA01 2.10.70.50 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.65 44.0 4.32e-01 72.3% 67.3%
5x6vG00 3.30.450.190 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.64 53.0 4.00e-01 100.0% 38.6%
7byjA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 55.0 4.45e-01 100.0% 52.6%
3o4hA01 2.130.10.150 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Peptidase/esterase 'gauge' domain 0.64 53.0 3.27e-01 97.9% 21.0%
2dmyA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.64 53.0 4.33e-01 100.0% 56.7%
3r7wB02 3.30.450.190 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.64 51.0 3.98e-01 97.9% 44.1%
2af5A01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.62 47.0 4.57e-01 89.4% 74.1%
4m7xA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.62 51.0 4.16e-01 93.6% 47.3%
3vpbE00 2.20.28.160 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.62 42.0 4.00e-01 70.2% 58.9%
8gn6A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.62 46.0 2.78e-01 80.9% 12.2%
2y8tA03 2.10.70.70 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.61 41.0 3.97e-01 70.2% 67.3%
2wozA00 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.61 48.0 2.95e-01 89.4% 23.5%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.61 43.0 3.12e-01 78.7% 30.5%
3qpbF00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.61 51.0 3.26e-01 97.9% 94.0%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.61 48.0 4.04e-01 100.0% 48.9%
3fehA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 50.0 3.85e-01 100.0% 43.5%
4hhvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 51.0 4.05e-01 100.0% 45.6%
1di2A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.60 51.0 4.56e-01 100.0% 84.1%
2qrdB01 2.20.25.290 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.60 41.0 4.44e-01 72.3% 100.0%
1txdA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 50.0 3.89e-01 100.0% 38.8%
2nugB02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.59 50.0 4.48e-01 100.0% 81.7%
6gfaA02 3.30.30.30 Alpha Beta › 2-Layer Sandwich › Defensin A-like › 0.59 39.0 3.71e-01 76.6% 53.6%
6k5gA01 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.59 41.0 2.56e-01 72.3% 95.8%
1e8oA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.59 47.0 4.17e-01 93.6% 66.2%
5i4dA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 50.0 4.34e-01 100.0% 90.8%
2w9jA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.59 50.0 4.44e-01 100.0% 70.4%
2qu8A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 51.0 3.40e-01 100.0% 49.5%
3f6gA01 3.30.160.740 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 49.0 4.64e-01 100.0% 87.9%
1e8oD00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.58 47.0 4.08e-01 93.6% 63.2%
3io5A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 44.0 2.83e-01 89.4% 18.1%
7ob9B01 3.90.1110.10 Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 0.58 49.0 3.31e-01 100.0% 59.4%
3zleA03 2.10.70.70 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.57 38.0 4.06e-01 70.2% 89.7%
8jx6A02 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.57 48.0 3.77e-01 95.7% 76.7%
2o62A02 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 47.0 3.51e-01 100.0% 82.5%
1i99I02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.56 46.0 3.61e-01 100.0% 94.0%
1xkiA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 43.0 3.23e-01 85.1% 58.6%
1u3eM01 3.90.75.20 Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › 0.55 38.0 3.02e-01 72.3% 69.8%
1t6aA02 3.30.310.120 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein 0.54 39.0 3.30e-01 76.6% 55.1%
3hj4A02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.53 41.0 2.93e-01 83.0% 87.8%
6l4qB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 42.0 3.17e-01 93.6% 58.5%
1u5kA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 42.0 3.65e-01 93.6% 82.9%
1nqzA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.53 40.0 2.81e-01 83.0% 32.7%
3gdoA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.53 45.0 3.01e-01 97.9% 76.9%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.52 42.0 3.32e-01 100.0% 80.8%
4g59B00 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.52 46.0 3.14e-01 100.0% 35.0%
3upuA03 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.51 40.0 2.97e-01 87.2% 44.3%
4q63A00 2.40.10.430 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.51 43.0 3.50e-01 95.7% 96.8%
ECOD (92)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3164102 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.85 72.0 7.38e-01 95.7% 97.8%
3425673 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.85 67.0 6.62e-01 87.2% 88.0%
3518968 5.1.5.4 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N 0.75 58.0 3.28e-01 83.0% 22.3%
3499134 2485.1.1.1 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.73 60.0 4.28e-01 91.5% 72.1%
3390566 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.71 61.0 4.81e-01 97.9% 47.0%
4012540 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.71 60.0 5.19e-01 97.9% 64.0%
5001238 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.71 57.0 4.42e-01 97.9% 39.1%
4962459 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 59.0 4.77e-01 93.6% 55.7%
3925738 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.70 57.0 4.53e-01 100.0% 52.7%
3730653 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.70 57.0 5.17e-01 100.0% 72.9%
3540167 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 60.0 4.36e-01 100.0% 36.3%
3735661 896.1.1.0 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.70 59.0 4.50e-01 93.6% 41.9%
3699899 214.1.1.6 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2_2 0.69 59.0 4.47e-01 100.0% 60.8%
3209694 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.69 59.0 4.61e-01 95.7% 47.0%
3597599 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.69 58.0 4.69e-01 100.0% 73.0%
1396826 4100.1.1.0 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.69 58.0 5.26e-01 100.0% 68.7%
4959885 4100.1.1.0 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.69 58.0 4.86e-01 97.9% 56.5%
3496244 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 61.0 4.35e-01 100.0% 38.6%
4995163 2006.1.1.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.68 57.0 3.70e-01 100.0% 70.4%
3925754 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.68 46.0 3.31e-01 80.9% 24.4%
3514660 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.68 55.0 4.66e-01 100.0% 64.4%
3891749 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.68 58.0 4.21e-01 100.0% 35.0%
3403381 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.68 55.0 4.52e-01 100.0% 53.0%
3479661 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.68 57.0 4.42e-01 97.9% 42.7%
3549045 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.67 57.0 4.44e-01 100.0% 43.6%
3965157 2003.1.2.58 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, Pyr_redox_2 0.67 47.0 3.15e-01 78.7% 18.4%
3225123 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.67 50.0 5.13e-01 89.4% 86.7%
3394097 7502.1.1.0 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.67 55.0 4.36e-01 93.6% 98.0%
3933100 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.67 55.0 4.95e-01 97.9% 67.1%
3586192 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.66 55.0 4.74e-01 93.6% 92.0%
3964837 512.1.1.1 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.66 53.0 4.69e-01 95.7% 61.3%
3517888 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.66 55.0 4.57e-01 97.9% 57.8%
4998507 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.66 45.0 4.38e-01 72.3% 72.2%
4032084 220.1.1.76 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 0.66 56.0 4.57e-01 100.0% 55.8%
3991383 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.66 54.0 4.54e-01 100.0% 60.0%
3797523 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.66 55.0 4.15e-01 100.0% 36.9%
3593387 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.66 55.0 4.08e-01 100.0% 38.8%
5051010 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.66 52.0 4.20e-01 97.9% 74.5%
3791186 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.65 53.0 4.49e-01 93.6% 53.8%
3722450 223.2.1.10 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Gtr1_RagA 0.65 53.0 3.94e-01 100.0% 35.2%
3403839 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.65 55.0 4.46e-01 95.7% 51.1%
146717 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.65 53.0 4.37e-01 100.0% 54.1%
5022840 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.64 52.0 4.50e-01 100.0% 85.9%
3933098 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.64 53.0 4.88e-01 100.0% 73.8%
3582821 220.1.1.5 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.64 55.0 4.53e-01 100.0% 56.7%
3216768 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.64 53.0 4.26e-01 100.0% 51.4%
3269549 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 52.0 3.70e-01 93.6% 28.4%
3629491 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 52.0 5.04e-01 100.0% 85.5%
3408937 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.64 52.0 4.55e-01 100.0% 62.5%
5024071 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.63 53.0 4.09e-01 97.9% 40.0%
4449349 2003.1.5.141 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › EcoRI_methylase 0.63 52.0 3.20e-01 91.5% 15.4%
4961065 512.1.1.1 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.63 51.0 4.85e-01 97.9% 78.3%
4956103 512.1.1.1 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.63 51.0 4.53e-01 97.9% 62.7%
3461521 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.62 48.0 3.66e-01 85.1% 38.3%
4981502 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 54.0 4.33e-01 100.0% 78.9%
4137630 512.1.1.1 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.62 50.0 4.54e-01 97.9% 67.1%
3919705 220.1.1.47 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_16 0.62 53.0 3.12e-01 100.0% 10.8%
5081495 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 50.0 3.82e-01 93.6% 55.0%
3265225 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.62 54.0 3.26e-01 100.0% 62.0%
3271779 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 53.0 3.85e-01 100.0% 34.5%
4031789 4959.1.1.0 ↗ a+b complex topology › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit 0.62 51.0 4.75e-01 97.9% 75.0%
3213262 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.62 52.0 4.18e-01 100.0% 50.0%
5065884 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.62 48.0 3.63e-01 89.4% 69.6%
3392130 4.1.1.223 ↗ beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.61 42.0 3.84e-01 74.5% 58.5%
4956106 512.1.1.0 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.61 50.0 4.50e-01 97.9% 67.1%
3422058 5.1.3.144 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like 0.60 46.0 2.95e-01 89.4% 30.4%
3907175 719.1.1.3 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › PAXX 0.60 51.0 4.07e-01 97.9% 66.0%
4975535 512.1.1.1 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.60 49.0 4.25e-01 97.9% 61.3%
5058514 512.1.1.1 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.60 49.0 4.42e-01 97.9% 67.1%
4991902 300.1.1.0 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.60 41.0 3.15e-01 74.5% 70.8%
4984648 512.1.1.0 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.60 47.0 4.15e-01 97.9% 63.7%
None — 0.60 46.0 2.55e-01 85.1% 6.2%
3605369 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 45.0 4.31e-01 83.0% 98.2%
5025256 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.59 48.0 2.80e-01 100.0% 11.4%
3638525 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 48.0 2.83e-01 93.6% 23.0%
5028042 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 47.0 3.63e-01 93.6% 84.2%
4271291 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 44.0 4.03e-01 89.4% 62.9%
4965400 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 47.0 3.58e-01 93.6% 83.3%
3254597 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.58 46.0 2.81e-01 87.2% 18.5%
4961843 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.57 45.0 2.99e-01 93.6% 21.3%
3217638 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.57 42.0 3.87e-01 93.6% 62.7%
5079725 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 43.0 4.19e-01 100.0% 96.7%
4011254 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.56 49.0 2.98e-01 100.0% 60.6%
3588583 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.56 43.0 3.32e-01 100.0% 75.2%
3690077 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.55 47.0 2.99e-01 100.0% 58.9%
5053650 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.55 44.0 3.37e-01 93.6% 88.0%
3434453 252.1.1.0 ↗ a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD 0.55 39.0 4.06e-01 93.6% 100.0%
5018514 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 46.0 3.33e-01 95.7% 62.2%
3718216 4051.1.1.0 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz 0.54 42.0 3.28e-01 97.9% 81.6%
4942828 298.1.1.24 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.53 45.0 3.14e-01 97.9% 75.6%
3616718 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.50 36.0 2.14e-01 74.5% 8.4%
3307718 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.50 41.0 3.07e-01 91.5% 53.3%