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HQ317391.1__AGH07698.1__CYVG_00255__00254
Bact-VirHQ317391.1__AGH07698.1__CYVG_00255__00254
Identity
- Accession:
- HQ317391 ↗
- Kingdom:
- phage
Quality
96.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Lipsvirus›
Cyanophage_S-SSM6a
TaxID: 682650
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-69
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1e7lA02 | 1.10.720.10 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.58 | 33.0 | 3.60e-01 | 71.6% | 67.3% |
| 2lbfB01 | 1.10.10.1410 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.56 | 38.0 | 3.83e-01 | 94.0% | 69.6% |
| 2k60A02 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.54 | 40.0 | 4.00e-01 | 95.5% | 79.4% |
| 3fseA01 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.53 | 39.0 | 2.90e-01 | 80.6% | 88.8% |
| 1mhyG02 | 1.20.1280.30 | Mainly Alpha › Up-down Bundle › Monooxygenase › Methane monooxygenase, gamma chain, domain 2 | 0.52 | 40.0 | 3.92e-01 | 100.0% | 79.5% |
| 3m03B00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.51 | 35.0 | 3.22e-01 | 92.5% | 51.6% |
| 2wa6A02 | 1.10.418.10 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain | 0.50 | 36.0 | 3.14e-01 | 77.6% | 57.4% |
| 2looA02 | 1.10.10.1740 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Transmembrane protein 14-like | 0.50 | 41.0 | 4.03e-01 | 97.0% | 94.7% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3684442 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 47.0 | 4.45e-01 | 100.0% | 77.6% |
| 4028797 | 1091.1.1.1 ↗ | alpha arrays › 60S acidic ribosomal protein P1/P2 › 60S acidic ribosomal protein P1/P2 › 60S acidic ribosomal protein P1/P2 › Ribosomal_60s | 0.56 | 41.0 | 4.18e-01 | 97.0% | 83.1% |
| 375971 | 633.21.1.1 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › DUF326 | 0.56 | 40.0 | 3.51e-01 | 76.1% | 83.8% |
| 3329386 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 46.0 | 4.37e-01 | 100.0% | 84.7% |
| 5002999 | 101.11.1.0 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 | 0.55 | 46.0 | 4.44e-01 | 98.5% | 87.5% |
| 3441094 | 101.1.2.252 ↗ | alpha arrays › HTH › HTH › winged helix domain › OHA | 0.55 | 46.0 | 4.45e-01 | 100.0% | 83.7% |
| 3535395 | 110.1.1.4 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › PYRIN | 0.53 | 38.0 | 3.32e-01 | 76.1% | 93.3% |
| 170134 | 2007.1.1.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › DJ-1_PfpI | 0.53 | 39.0 | 2.88e-01 | 80.6% | 86.6% |
| 4054662 | 101.1.10.42 ↗ | alpha arrays › HTH › HTH › Cyclin-like › DUF4158 | 0.52 | 42.0 | 3.91e-01 | 98.5% | 72.6% |
| 3970188 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.51 | 42.0 | 3.44e-01 | 100.0% | 88.7% |
| 3944356 | 101.1.10.42 ↗ | alpha arrays › HTH › HTH › Cyclin-like › DUF4158 | 0.51 | 42.0 | 3.82e-01 | 98.5% | 70.0% |