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HQ332138.1__AGN33778.1__PANG_00059__00057

Bact-Vir

HQ332138.1__AGN33778.1__PANG_00059__00057

Identity

Accession:
HQ332138 ↗
Kingdom:
phage

Quality

86.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 29-77
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
8sl7B01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.75 43.0 2.69e-01 81.6% 10.9%
6vddA02 1.20.1060.10 Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 0.69 51.0 3.93e-01 100.0% 34.8%
5okaA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.69 55.0 3.15e-01 93.9% 9.3%
3u37A02 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.65 54.0 3.42e-01 91.8% 41.9%
4xr7F02 1.10.287.3700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.64 45.0 3.68e-01 73.5% 78.9%
3r2qA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.59 40.0 3.46e-01 73.5% 87.6%
5xgbA03 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.58 48.0 3.08e-01 93.9% 19.3%
6zhhA01 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.57 42.0 2.89e-01 79.6% 77.2%
5g0aA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.57 42.0 2.60e-01 79.6% 93.7%
4jedA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 37.0 3.10e-01 71.4% 78.6%
1afsA00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.51 36.0 2.26e-01 77.6% 22.6%
4dkwA00 3.30.420.280 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.50 37.0 2.57e-01 85.7% 63.4%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4943989 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.77 47.0 3.20e-01 83.7% 18.8%
2880851 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.74 54.0 3.88e-01 79.6% 28.6%
3209226 2003.1.2.17 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase 0.64 58.0 3.43e-01 100.0% 96.3%
3802019 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.63 43.0 2.86e-01 73.5% 16.3%
5048633 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.56 49.0 3.43e-01 100.0% 46.3%
3343332 170.1.1.26 alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein-C › Retrovirus capsid protein-C › DUF7746 0.53 36.0 3.21e-01 85.7% 48.6%