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HQ332139.1__AGF91518.1__PRRG_00007__00007

Bact-Vir

HQ332139.1__AGF91518.1__PRRG_00007__00007

Identity

Accession:
HQ332139 ↗
Kingdom:
phage

Quality

81.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Prochlorococcus_phage_P-RSP2

TaxID: 756283

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-104
PDB
Domain cluster: representative
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pttB00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 44.0 4.20e-01 70.0% 75.0%
1y6kR01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 45.0 4.31e-01 72.2% 94.1%
4brvA00 2.60.40.730 Mainly Beta › Sandwich › Immunoglobulin-like › SOR catalytic domain 0.64 44.0 3.97e-01 71.1% 54.8%
3n40P04 2.60.40.2400 Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, domain C 0.63 37.0 4.05e-01 70.0% 71.2%
1x3dA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 44.0 4.04e-01 73.3% 81.4%
1hqz800 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.63 44.0 3.82e-01 72.2% 52.3%
6brbD00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 43.0 4.37e-01 88.9% 74.7%
4dohB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 41.0 4.19e-01 70.0% 73.9%
5jtwA05 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.60 43.0 3.95e-01 83.3% 56.2%
1cfbA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 44.0 4.17e-01 93.3% 65.1%
4pjeE01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 42.0 3.96e-01 72.2% 75.9%
4n3tA00 2.60.40.200 Mainly Beta › Sandwich › Immunoglobulin-like › Superoxide dismutase, copper/zinc binding domain 0.59 40.0 3.39e-01 70.0% 65.4%
5jtwA03 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 40.0 3.65e-01 71.1% 69.3%
1cd9B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 43.0 4.22e-01 91.1% 70.4%
3v6oA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 41.0 4.16e-01 72.2% 100.0%
6rptC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 38.0 3.60e-01 71.1% 66.1%
2fauA01 2.60.40.640 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 39.0 3.40e-01 75.6% 62.3%
1tdqA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 45.0 4.43e-01 87.8% 96.8%
2db8A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 46.0 4.31e-01 91.1% 89.1%
5hdwA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.55 38.0 3.42e-01 72.2% 61.8%
5l73A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 44.0 3.60e-01 90.0% 78.2%
3og4B01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 44.0 4.26e-01 92.2% 97.1%
1ayrB02 2.60.40.640 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 40.0 3.24e-01 82.2% 72.9%
1xe0C00 2.60.120.340 Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain 0.52 36.0 3.48e-01 72.2% 65.3%
2l3bA00 2.60.40.2410 Mainly Beta › Sandwich › Immunoglobulin-like › Uncharacterised protein PF12988, DUF3872 0.52 36.0 3.22e-01 72.2% 56.2%
2re9A01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.51 39.0 3.37e-01 84.4% 84.1%
1hw7A01 3.55.30.10 Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain 0.51 41.0 3.40e-01 91.1% 63.6%
4fixA01 3.90.550.60 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › 0.50 40.0 2.69e-01 90.0% 39.7%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4355764 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.71 49.0 4.17e-01 72.2% 59.3%
5023641 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 45.0 5.16e-01 70.0% 100.0%
3560911 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.63 43.0 4.26e-01 91.1% 66.3%
5023115 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.63 42.0 4.75e-01 88.9% 95.4%
None — 0.62 43.0 4.36e-01 88.9% 72.2%
3980835 11.1.1.997 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_J 0.62 43.0 4.16e-01 73.3% 92.4%
3540762 11.1.1.129 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Interfer-bind 0.62 43.0 4.03e-01 73.3% 60.0%
5046430 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 44.0 4.35e-01 92.2% 70.5%
1286124 11.1.1.60 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Vps26 0.61 43.0 3.66e-01 74.4% 60.7%
5041184 11.1.1.103 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB 0.61 45.0 4.54e-01 84.4% 77.8%
3909420 11.1.1.129 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Interfer-bind 0.60 41.0 4.06e-01 70.0% 70.5%
3870843 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 42.0 3.72e-01 73.3% 54.6%
3939974 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 50.0 3.03e-01 92.2% 28.7%
3699242 11.1.1.68 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ASF1_hist_chap 0.59 47.0 4.04e-01 88.9% 65.3%
5062063 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 48.0 4.72e-01 87.8% 100.0%
3742638 224.1.1.1 ↗ a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF 0.58 41.0 3.63e-01 73.3% 57.8%
5059287 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 47.0 4.70e-01 92.2% 83.2%
3704245 11.1.1.60 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Vps26 0.58 45.0 3.78e-01 82.2% 61.3%
5038559 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 39.0 4.33e-01 73.3% 91.4%
3734833 304.14.1.0 ↗ a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) 0.57 41.0 4.15e-01 75.6% 87.8%
3890675 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.55 45.0 4.41e-01 88.9% 97.0%
2568333 11.1.1.237 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG4 0.55 38.0 3.58e-01 72.2% 66.4%
3495557 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.55 41.0 3.47e-01 82.2% 58.3%
1893015 10.1.1.10 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.54 44.0 3.60e-01 90.0% 78.2%
3406668 11.1.1.536 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1091 0.54 41.0 3.45e-01 82.2% 70.0%
3893718 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.52 40.0 3.40e-01 83.3% 83.9%
2887044 54.1.1.6 ↗ beta barrels › EV matrix protein › EV matrix protein › EV matrix protein › Matrix_Paramyxo_C 0.52 43.0 3.59e-01 90.0% 80.4%
4411405 206.1.3.9 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Synapsin_C 0.52 39.0 3.40e-01 81.1% 70.3%
4870596 11.1.1.272 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TcA_RBD 0.52 45.0 3.92e-01 100.0% 82.3%
3799969 206.1.3.9 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Synapsin_C 0.52 38.0 2.98e-01 78.9% 50.5%
3510399 206.1.3.9 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Synapsin_C 0.51 39.0 3.00e-01 82.2% 47.9%
3413120 10.2.1.5 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide 0.51 41.0 3.16e-01 90.0% 68.8%