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HQ332139.1__AGF91541.1__PRRG_00030__00030
Bact-VirHQ332139.1__AGF91541.1__PRRG_00030__00030
Identity
- Accession:
- HQ332139 ↗
- Kingdom:
- phage
Quality
56.8
mean pLDDT
Taxonomy
TaxID: 756283
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-97_172-229
D2
high
residues 99-169
Domain cluster:
rep: NC_048679.1__YP_009835506.1__HWB34_gp31__00031__D132-209
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vw3C01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.77 | 70.0 | 5.68e-01 | 100.0% | 72.5% |
| 3gqbA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.75 | 65.0 | 6.51e-01 | 98.6% | 95.8% |
| 6f2mA02 | 2.40.30.290 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.74 | 66.0 | 6.19e-01 | 100.0% | 94.3% |
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.72 | 61.0 | 5.64e-01 | 98.6% | 74.4% |
| 4rlzA02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.71 | 61.0 | 5.37e-01 | 98.6% | 98.2% |
| 1kjzA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.71 | 58.0 | 5.30e-01 | 88.7% | 82.6% |
| 3qtgA02 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.70 | 60.0 | 5.51e-01 | 95.8% | 92.6% |
| 3wndA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.70 | 56.0 | 5.12e-01 | 87.3% | 86.2% |
| 2wssA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.69 | 59.0 | 5.44e-01 | 97.2% | 73.1% |
| 3gg8C03 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.68 | 58.0 | 5.25e-01 | 95.8% | 94.8% |
| 3okxB00 | 2.40.30.70 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like | 0.68 | 57.0 | 4.57e-01 | 95.8% | 79.9% |
| 2v31A01 | 2.40.30.180 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Ubiquitin-activating enzyme E1, FCCH domain | 0.68 | 58.0 | 5.31e-01 | 100.0% | 82.5% |
| 3t05A02 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.68 | 58.0 | 5.26e-01 | 95.8% | 95.9% |
| 1v0fB03 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.67 | 58.0 | 5.51e-01 | 100.0% | 97.6% |
| 8eq1A01 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.67 | 54.0 | 5.05e-01 | 90.1% | 100.0% |
| 3op1A02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.66 | 59.0 | 5.08e-01 | 100.0% | 72.1% |
| 2dpyA00 | 3.40.50.12240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.65 | 56.0 | 3.49e-01 | 98.6% | 17.3% |
| 4zgnB00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.65 | 50.0 | 4.53e-01 | 87.3% | 78.6% |
| 4ac9C04 | 2.40.10.190 | Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 | 0.64 | 56.0 | 5.43e-01 | 100.0% | 92.5% |
| 1a3wB03 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.64 | 55.0 | 5.00e-01 | 97.2% | 93.8% |
| 4v15A01 | 2.40.37.20 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › D-serine dehydratase-like domain | 0.63 | 55.0 | 4.44e-01 | 100.0% | 62.5% |
| 3x1lB03 | 2.60.40.4350 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 46.0 | 4.13e-01 | 83.1% | 82.9% |
| 4fkeA01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.61 | 51.0 | 3.64e-01 | 94.4% | 33.6% |
| 3zn6A02 | 2.60.40.3410 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 48.0 | 4.61e-01 | 94.4% | 97.7% |
| 4psrA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.56 | 47.0 | 4.04e-01 | 98.6% | 63.9% |
| 2vbkA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.56 | 45.0 | 2.78e-01 | 94.4% | 12.9% |
| 5y4mA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 45.0 | 3.67e-01 | 100.0% | 57.3% |
| 5e4eC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 44.0 | 4.01e-01 | 97.2% | 77.2% |
| 1df0A03 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 44.0 | 3.74e-01 | 100.0% | 94.0% |
| 2bseA00 | 2.60.40.1830 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain | 0.53 | 43.0 | 3.91e-01 | 97.2% | 87.9% |
| 4lr4A02 | 2.60.120.1430 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 45.0 | 3.53e-01 | 100.0% | 50.0% |
| 2wuhA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 45.0 | 3.55e-01 | 100.0% | 93.9% |
| 4aqzA00 | 2.60.40.3470 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 41.0 | 3.49e-01 | 93.0% | 69.6% |
| 4odbA00 | 2.60.90.20 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Virus attachment protein , globular domain | 0.52 | 42.0 | 3.43e-01 | 97.2% | 64.2% |
| 4aw7A03 | 2.60.120.1200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 43.0 | 3.77e-01 | 100.0% | 68.9% |
| 4gaaA01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.52 | 45.0 | 3.34e-01 | 100.0% | 36.8% |
| 3l4yA05 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 42.0 | 3.53e-01 | 97.2% | 55.8% |
| 2w47A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 43.0 | 3.63e-01 | 100.0% | 59.3% |
| 4n2oA00 | 2.60.40.680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 41.0 | 3.20e-01 | 97.2% | 49.2% |
| 4zxeC00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 42.0 | 3.58e-01 | 100.0% | 97.8% |
| 2b5iB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 41.0 | 3.82e-01 | 94.4% | 83.0% |
| 2w9xB01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 36.0 | 3.31e-01 | 100.0% | 55.0% |
| 2moqA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 42.0 | 3.38e-01 | 94.4% | 77.7% |
ECOD (55)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3969204 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.85 | 79.0 | 7.77e-01 | 100.0% | 98.7% |
| 5078307 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.84 | 75.0 | 7.34e-01 | 95.8% | 100.0% |
| 4027218 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.81 | 75.0 | 7.17e-01 | 100.0% | 95.0% |
| 3944437 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.81 | 74.0 | 7.10e-01 | 100.0% | 97.5% |
| 4311277 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.79 | 72.0 | 5.15e-01 | 100.0% | 99.5% |
| 4489240 | 1.1.7.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L3 | 0.79 | 71.0 | 5.16e-01 | 100.0% | 97.4% |
| 3513769 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.78 | 71.0 | 6.98e-01 | 100.0% | 100.0% |
| 4217174 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.77 | 68.0 | 6.91e-01 | 100.0% | 98.6% |
| 5079674 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.77 | 69.0 | 6.78e-01 | 98.6% | 97.3% |
| 3512272 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.76 | 68.0 | 6.66e-01 | 97.2% | 97.3% |
| 3973332 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.76 | 69.0 | 6.84e-01 | 100.0% | 94.7% |
| 4880414 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.75 | 64.0 | 6.53e-01 | 97.2% | 97.1% |
| 5078547 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.73 | 63.0 | 5.74e-01 | 98.6% | 71.6% |
| 4350337 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.72 | 64.0 | 6.35e-01 | 100.0% | 100.0% |
| 3642150 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.72 | 61.0 | 5.60e-01 | 95.8% | 73.7% |
| 4235076 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.72 | 63.0 | 6.13e-01 | 100.0% | 90.0% |
| 5051090 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.72 | 64.0 | 6.15e-01 | 100.0% | 90.0% |
| 5041618 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.71 | 63.0 | 5.75e-01 | 98.6% | 86.2% |
| 4194551 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.71 | 63.0 | 6.19e-01 | 98.6% | 93.3% |
| 4521518 | 1.1.7.121 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Phage_BR0599 | 0.71 | 63.0 | 5.38e-01 | 100.0% | 65.2% |
| 4402716 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.71 | 62.0 | 5.91e-01 | 100.0% | 88.2% |
| 5057245 | 1.1.15.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like | 0.70 | 60.0 | 5.57e-01 | 95.8% | 93.3% |
| 3975132 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.70 | 61.0 | 5.66e-01 | 100.0% | 76.7% |
| 4984743 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.70 | 59.0 | 5.41e-01 | 94.4% | 94.7% |
| 4066146 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.70 | 62.0 | 5.48e-01 | 100.0% | 71.4% |
| 4311355 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.70 | 60.0 | 5.34e-01 | 94.4% | 96.0% |
| 3483841 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.70 | 61.0 | 5.46e-01 | 100.0% | 83.5% |
| 4890345 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.69 | 61.0 | 5.79e-01 | 100.0% | 90.6% |
| 4060488 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.69 | 61.0 | 5.88e-01 | 100.0% | 90.0% |
| 5038467 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 60.0 | 5.80e-01 | 97.2% | 100.0% |
| 4949379 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.69 | 59.0 | 5.31e-01 | 97.2% | 92.0% |
| 4337888 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.69 | 59.0 | 5.30e-01 | 97.2% | 91.0% |
| 4083044 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.69 | 61.0 | 5.99e-01 | 100.0% | 100.0% |
| 4338601 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.69 | 59.0 | 5.53e-01 | 100.0% | 77.8% |
| 4954732 | 1.1.15.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like | 0.68 | 57.0 | 5.36e-01 | 95.8% | 95.6% |
| 3322961 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.68 | 56.0 | 5.20e-01 | 90.1% | 100.0% |
| 4125814 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.68 | 59.0 | 5.84e-01 | 100.0% | 94.7% |
| 4959432 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.67 | 60.0 | 5.79e-01 | 100.0% | 88.7% |
| 3590326 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.67 | 56.0 | 5.01e-01 | 95.8% | 96.2% |
| 3987212 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.67 | 56.0 | 5.00e-01 | 95.8% | 93.3% |
| 3261422 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.67 | 57.0 | 5.04e-01 | 95.8% | 90.5% |
| 3880866 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.66 | 56.0 | 4.98e-01 | 97.2% | 92.4% |
| 4162532 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.66 | 57.0 | 5.68e-01 | 100.0% | 96.0% |
| 5015718 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.66 | 58.0 | 5.51e-01 | 100.0% | 91.6% |
| 4403870 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.65 | 55.0 | 5.11e-01 | 98.6% | 74.7% |
| 1005556 | 10.2.1.65 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › VP17_central_barrel | 0.61 | 50.0 | 4.70e-01 | 93.0% | 97.7% |
| 4957583 | 3386.2.1.0 ↗ | beta sandwiches › gp9 C-terminal domain-like › gp10 domain 2 and domain 3 › gp10 domain 2 and domain 3 | 0.59 | 47.0 | 4.80e-01 | 95.8% | 95.7% |
| 3883683 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 47.0 | 4.28e-01 | 95.8% | 80.0% |
| 5081149 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.56 | 45.0 | 4.60e-01 | 94.4% | 97.1% |
| 184925 | 11.21.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein › Tailspike_C | 0.56 | 45.0 | 4.51e-01 | 94.4% | 90.4% |
| 3619352 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.55 | 46.0 | 3.72e-01 | 100.0% | 63.7% |
| 1111986 | 10.32.1.84 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF6947 | 0.53 | 45.0 | 3.67e-01 | 100.0% | 57.5% |
| 5023364 | 75.1.1.0 ↗ | beta barrels › Cyclophilin-like › Cyclophilin-like › Cyclophilin-like | 0.52 | 42.0 | 3.62e-01 | 95.8% | 78.5% |
| 4930839 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.51 | 42.0 | 3.71e-01 | 95.8% | 80.0% |
| 3396144 | 10.21.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 | 0.50 | 37.0 | 3.02e-01 | 80.3% | 53.8% |