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AGN33812.1
Arc-VirHQ332141__AGN33812.1__HALG-00024__00024
Identity
- Accession:
- HQ332141 ↗
- Protein ID:
- AGN33812.1 ↗
- Kingdom:
- archaea
Quality
74.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Kirjokansivirales›
Graaviviridae›
Seejivirus›
Halorubrum_virus_CGphi46
TaxID: 754066
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-81
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wewA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.53 | 38.0 | 3.66e-01 | 84.3% | 66.7% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3928404 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.73 | 42.0 | 5.17e-01 | 70.0% | 100.0% |
| 3806013 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.64 | 43.0 | 4.38e-01 | 75.7% | 70.0% |
| 3929512 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.63 | 45.0 | 4.78e-01 | 77.1% | 86.7% |
| 3336166 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.61 | 45.0 | 4.77e-01 | 77.1% | 91.7% |
| 3493960 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.61 | 43.0 | 4.49e-01 | 77.1% | 80.0% |
| 3208984 | 284.1.3.1 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › SNF5 | 0.60 | 40.0 | 3.23e-01 | 72.9% | 34.5% |
| 3233546 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.58 | 40.0 | 2.98e-01 | 70.0% | 30.9% |
| 3459594 | 377.9.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like | 0.57 | 35.0 | 4.07e-01 | 71.4% | 95.6% |
| 3823372 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.54 | 39.0 | 3.87e-01 | 77.1% | 76.0% |
| 3452596 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.54 | 36.0 | 3.88e-01 | 78.6% | 81.7% |
| 3427632 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.52 | 32.0 | 3.55e-01 | 70.0% | 78.2% |