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HQ337022.1__AGG54680.1__PROG_00027__00024
Bact-VirHQ337022.1__AGG54680.1__PROG_00027__00024
Identity
- Accession:
- HQ337022 ↗
- Kingdom:
- phage
Quality
89.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Autographivirales›
Tangaroavirus›
Prochlorococcus_phage_P-SSP10
TaxID: 885867
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-71
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ek5B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 33.0 | 2.80e-01 | 83.6% | 33.0% |
| 3oc2A01 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.53 | 40.0 | 3.03e-01 | 83.6% | 63.0% |
| 1eyvB00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.51 | 39.0 | 3.08e-01 | 80.6% | 82.0% |
| 3l2pA01 | 1.10.3260.10 | Mainly Alpha › Orthogonal Bundle › DNA ligase i, domain 1 › DNA ligase, ATP-dependent, N-terminal domain | 0.51 | 36.0 | 2.76e-01 | 79.1% | 89.4% |
| 3g7dA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.50 | 39.0 | 3.66e-01 | 91.0% | 68.6% |
| 3w5mA05 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.50 | 37.0 | 2.45e-01 | 82.1% | 48.7% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3386163 | 1077.1.1.1 ↗ | few secondary structure elements › RelA zinc-finger domain › RelA zinc-finger domain › RelA zinc-finger domain › RelA_RIS | 0.65 | 48.0 | 3.77e-01 | 79.1% | 94.3% |
| 4995939 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.62 | 54.0 | 4.68e-01 | 100.0% | 62.9% |
| 4139094 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.58 | 46.0 | 4.06e-01 | 91.0% | 58.0% |
| None | — | 0.57 | 43.0 | 3.01e-01 | 82.1% | 85.7% | |
| 3487350 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.54 | 37.0 | 3.26e-01 | 97.0% | 48.0% |
| 3657096 | 223.2.1.3 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s | 0.51 | 38.0 | 2.99e-01 | 85.1% | 56.4% |