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HQ615693.1__AEC52972.1__SCRM01_025__00025
Bact-VirHQ615693.1__AEC52972.1__SCRM01_025__00025
Identity
- Accession:
- HQ615693 ↗
- Kingdom:
- phage
Quality
92.9
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Synechococcus_phage_S-CRM01
TaxID: 1026955
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-71
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5c7qB00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.54 | 42.0 | 3.26e-01 | 91.4% | 68.3% |
| 2xc8A00 | 2.60.40.2980 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 41.0 | 3.52e-01 | 90.0% | 59.5% |
| 3c9aA02 | 2.20.20.150 | Mainly Beta › Single Sheet › Anthopleurin-A › | 0.50 | 32.0 | 3.33e-01 | 100.0% | 72.1% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5021698 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.61 | 43.0 | 2.88e-01 | 98.6% | 19.2% |
| 3927673 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.56 | 39.0 | 2.52e-01 | 72.9% | 37.3% |
| 3942344 | 2485.3.1.19 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › PF30928 | 0.54 | 43.0 | 2.88e-01 | 88.6% | 82.5% |
| 3270655 | 5001.1.1.5 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 | 0.54 | 38.0 | 2.66e-01 | 75.7% | 80.8% |
| 2061904 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.53 | 37.0 | 2.84e-01 | 72.9% | 91.0% |
| 4027011 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 44.0 | 2.95e-01 | 95.7% | 45.2% |
| 4550526 | 63.1.1.1 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › CIMR | 0.52 | 42.0 | 3.33e-01 | 91.4% | 73.8% |
| 3939327 | 5001.1.1.5 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 | 0.52 | 35.0 | 2.36e-01 | 72.9% | 41.2% |
| 3227803 | 70.1.1.0 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like | 0.52 | 29.0 | 3.06e-01 | 85.7% | 58.5% |
| 5048068 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.51 | 44.0 | 3.09e-01 | 100.0% | 57.6% |
| 5072585 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.51 | 44.0 | 3.05e-01 | 100.0% | 52.1% |
| 3485859 | 304.47.1.1 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › SEA | 0.51 | 40.0 | 3.35e-01 | 100.0% | 47.7% |
D2
high
residues 80-171
Domain cluster:
rep: NC_031927.1__YP_009323098.1__BOW86_gp165__00165__D63-141