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HQ615693.1__AEC53009.1__SCRM01_062c__00062
Bact-VirHQ615693.1__AEC53009.1__SCRM01_062c__00062
Identity
- Accession:
- HQ615693 ↗
- Kingdom:
- phage
Quality
89.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Synechococcus_phage_S-CRM01
TaxID: 1026955
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-59
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hugA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 48.0 | 4.23e-01 | 83.1% | 46.3% |
| 3otdA00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.73 | 55.0 | 3.62e-01 | 81.4% | 20.8% |
| 6wshA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 52.0 | 5.35e-01 | 76.3% | 94.5% |
| 8ctsB01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.70 | 52.0 | 4.58e-01 | 79.7% | 64.4% |
| 5cbgA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.69 | 50.0 | 4.19e-01 | 78.0% | 53.9% |
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 52.0 | 5.23e-01 | 81.4% | 94.8% |
| 3f6tA02 | 1.10.20.110 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › | 0.67 | 57.0 | 4.23e-01 | 93.2% | 46.9% |
| 3ousA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.66 | 53.0 | 4.76e-01 | 86.4% | 64.6% |
| 5kbwB00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.64 | 46.0 | 3.31e-01 | 74.6% | 55.6% |
| 1aipH03 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.57 | 44.0 | 4.62e-01 | 88.1% | 96.2% |
| 3gnaA00 | 6.10.140.510 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 38.0 | 3.66e-01 | 83.1% | 63.2% |
| 1cy9A01 | 1.10.290.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 4 › Topoisomerase I, domain 4 | 0.53 | 36.0 | 2.99e-01 | 93.2% | 36.4% |
| 1owfA00 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.53 | 42.0 | 3.58e-01 | 86.4% | 55.2% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5001408 | 4995.1.1.0 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like | 0.72 | 48.0 | 3.97e-01 | 76.3% | 41.0% |
| 3589343 | 604.39.1.6 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › QueT | 0.69 | 48.0 | 3.47e-01 | 72.9% | 50.9% |
| 3588464 | 604.39.1.5 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › ECF_trnsprt | 0.65 | 49.0 | 3.58e-01 | 83.1% | 54.1% |
| 3215052 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.60 | 46.0 | 4.09e-01 | 81.4% | 71.8% |