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HQ615693.1__AEC53109.1__SCRM01_163c__00163

Bact-Vir

HQ615693.1__AEC53109.1__SCRM01_163c__00163

Identity

Accession:
HQ615693 ↗
Kingdom:
phage

Quality

65.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 30-79
PDB
Domain cluster: representative
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fpqA00 3.90.1240.10 Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" 0.71 63.0 3.68e-01 100.0% 44.7%
1xtfA00 3.90.1240.10 Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" 0.71 63.0 3.67e-01 100.0% 44.3%
1f02T00 4.10.820.10 Few Secondary Structures › Irregular › Translocated Intimin Receptor; Chain T › Translocated intimin receptor, central domain 0.69 57.0 5.23e-01 92.0% 90.9%
1t3aA00 3.90.1240.10 Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" 0.69 60.0 3.53e-01 100.0% 43.5%
2ek5B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 51.0 4.06e-01 84.0% 41.3%
3zqcA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 39.0 3.60e-01 92.0% 43.8%
4b6lA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.67 46.0 3.17e-01 88.0% 20.8%
1f0jA00 1.10.1300.10 Mainly Alpha › Orthogonal Bundle › Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b › 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain 0.67 53.0 3.15e-01 94.0% 12.3%
1epwA01 3.90.1240.10 Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" 0.67 58.0 3.37e-01 100.0% 45.0%
6jgwA01 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.66 55.0 4.13e-01 92.0% 81.8%
1bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 47.0 3.84e-01 76.0% 73.7%
2yyiA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.65 55.0 3.59e-01 94.0% 23.2%
5d8cA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.63 55.0 4.10e-01 98.0% 69.8%
3sigA00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.63 53.0 3.31e-01 94.0% 52.5%
6ks6A02 3.30.260.10 Alpha Beta › 2-Layer Sandwich › GROEL; domain 2 › TCP-1-like chaperonin intermediate domain 0.62 52.0 4.03e-01 92.0% 64.8%
2zhgA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.62 53.0 3.92e-01 98.0% 38.0%
4oo2A02 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.62 54.0 3.60e-01 100.0% 35.0%
3gpvA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.62 55.0 4.20e-01 100.0% 80.5%
5i41B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.61 47.0 4.28e-01 84.0% 70.1%
4g59C02 3.30.500.30 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.61 53.0 3.73e-01 98.0% 38.0%
3hh0A01 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.61 45.0 4.07e-01 82.0% 70.8%
5hvqC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 45.0 3.60e-01 90.0% 40.8%
3hwcA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.60 49.0 3.27e-01 94.0% 23.3%
4xr7F02 1.10.287.3700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.59 47.0 3.94e-01 90.0% 71.1%
8d3mA02 1.20.120.920 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain 0.59 48.0 3.19e-01 98.0% 35.8%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 41.0 3.68e-01 84.0% 51.4%
4g56A01 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.58 49.0 3.04e-01 94.0% 36.0%
2l2oA00 1.10.10.1540 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain 0.58 44.0 3.80e-01 84.0% 50.6%
3gueA02 2.160.10.10 Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins 0.57 44.0 3.61e-01 92.0% 99.1%
1l5aA01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.57 51.0 3.39e-01 98.0% 61.8%
6zhhA01 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.56 46.0 3.16e-01 92.0% 35.0%
3aluA00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.56 43.0 3.16e-01 90.0% 72.0%
1v4gA01 6.10.140.800 Special › Helix non-globular › Helix Hairpins › 0.54 42.0 3.80e-01 86.0% 75.4%
2xfvA00 3.10.260.30 Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › 0.54 39.0 3.15e-01 80.0% 79.6%
2e1mA05 1.10.405.10 Mainly Alpha › Orthogonal Bundle › Guanine Nucleotide Dissociation Inhibitor; domain 1 › Guanine Nucleotide Dissociation Inhibitor, domain 1 0.54 46.0 3.82e-01 98.0% 81.3%
7febA03 3.40.50.12790 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › FHIPEP family, domain 4 0.54 43.0 3.56e-01 88.0% 51.1%
3ho6B00 3.40.50.11050 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › MARTX cysteine protease (CPD) domain 0.53 45.0 2.85e-01 94.0% 43.0%
2wteA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 36.0 3.30e-01 74.0% 95.8%
1z1nX02 3.90.10.10 Alpha Beta › Alpha-Beta Complex › Cytochrome C3 › Cytochrome C3 0.52 44.0 3.44e-01 100.0% 55.6%
3m0fA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.52 37.0 3.15e-01 98.0% 46.8%
3b73B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 36.0 3.11e-01 76.0% 92.1%
3py8A04 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.52 43.0 3.23e-01 100.0% 86.8%
5b3hC01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.51 30.0 3.11e-01 84.0% 54.2%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 37.0 3.24e-01 76.0% 63.0%
1qhlA00 3.40.1140.10 Alpha Beta › 3-Layer(aba) Sandwich › N-terminal domain of mukB › 0.51 44.0 2.94e-01 98.0% 90.1%
ECOD (68)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5070087 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.78 68.0 5.71e-01 100.0% 62.4%
4995595 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.77 60.0 3.79e-01 86.0% 17.0%
3277618 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.76 57.0 4.93e-01 80.0% 58.7%
3183367 109.4.1.356 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans 0.75 54.0 3.40e-01 78.0% 14.8%
3731212 192.24.1.0 alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain 0.72 56.0 4.59e-01 94.0% 48.2%
4935618 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.72 56.0 4.49e-01 84.0% 80.0%
3301914 109.27.1.3 alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain › NPH3 0.71 55.0 3.71e-01 100.0% 22.0%
3655694 4992.1.1.0 extended segments › RelB-like › RelB-like › RelB-like 0.71 56.0 4.69e-01 86.0% 52.9%
3255069 5050.1.1.10 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_2 0.70 58.0 3.97e-01 100.0% 24.9%
3597508 101.1.17.0 alpha arrays › HTH › HTH › FF domain 0.70 49.0 4.16e-01 78.0% 46.3%
3271032 5050.1.1.2 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › PTR2 0.70 62.0 3.56e-01 100.0% 23.6%
3844936 101.1.1.273 alpha arrays › HTH › HTH › Three-helical HTH › PF26094 0.70 53.0 4.72e-01 86.0% 57.3%
3788382 101.1.15.0 alpha arrays › HTH › HTH › HAT1, C-terminal domain 0.69 47.0 4.06e-01 72.0% 82.5%
3691173 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.67 48.0 3.47e-01 78.0% 26.2%
4933456 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.67 40.0 3.41e-01 86.0% 37.5%
5073726 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 49.0 4.17e-01 80.0% 85.9%
3632380 5050.1.1.0 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.66 55.0 3.64e-01 100.0% 20.9%
4183916 2004.1.1.59 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CoaE 0.66 53.0 3.53e-01 92.0% 36.3%
3903618 219.1.1.54 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C98 0.65 58.0 3.61e-01 100.0% 30.7%
3785380 5051.1.1.6 alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Aa_trans 0.65 57.0 3.33e-01 96.0% 26.7%
4945461 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 47.0 3.83e-01 78.0% 72.6%
3182185 5050.1.1.58 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › NFD4_C 0.64 54.0 3.53e-01 100.0% 20.0%
4251053 4106.1.1.1 few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC 0.64 57.0 3.58e-01 98.0% 56.1%
3431346 2003.1.1.51 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP 0.64 55.0 3.39e-01 100.0% 31.0%
4946594 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 46.0 3.66e-01 76.0% 74.0%
3320650 101.1.2.396 alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.64 48.0 3.81e-01 80.0% 72.0%
3498627 7015.1.1.1 alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › DHHC 0.64 55.0 3.54e-01 100.0% 20.4%
3495561 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.64 53.0 3.45e-01 98.0% 20.0%
4942882 4156.1.1.6 alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Helicase_dom4_arc 0.63 57.0 3.88e-01 100.0% 55.3%
3775826 4016.1.1.0 alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase 0.63 52.0 3.84e-01 100.0% 33.1%
3538512 3892.1.1.0 alpha bundles › Transhydrogeanse domain II › Transhydrogeanse domain II › Transhydrogeanse domain II 0.63 53.0 3.72e-01 100.0% 30.0%
3382543 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 51.0 4.23e-01 90.0% 53.3%
4282188 5059.1.1.59 alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EmrE 0.63 56.0 3.42e-01 100.0% 35.5%
4586962 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.63 50.0 3.81e-01 92.0% 37.5%
3974773 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 48.0 3.83e-01 88.0% 41.0%
5051539 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.62 46.0 3.63e-01 84.0% 80.0%
3916642 192.2.1.56 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › KIF9 0.61 51.0 3.57e-01 90.0% 44.0%
3930284 246.3.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos 0.61 55.0 3.19e-01 100.0% 30.6%
4928633 101.1.2.18 alpha arrays › HTH › HTH › winged helix domain › Ribosomal_S19e 0.61 51.0 4.05e-01 96.0% 57.1%
3717247 4106.1.1.1 few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC 0.61 51.0 3.37e-01 96.0% 40.5%
5036096 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 47.0 3.69e-01 86.0% 95.5%
5073530 2004.11.1.1 a/b three-layered sandwiches › P-loop domains-like › PEP carboxykinase N-terminal domain › PEP carboxykinase N-terminal domain › PEPCK_ATP 0.60 51.0 3.40e-01 94.0% 50.3%
3284729 101.1.9.128 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR, MerR-DNA-bind, MerR_1 0.60 46.0 3.71e-01 90.0% 77.3%
3905610 2484.1.1.120 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_4 0.58 46.0 2.88e-01 98.0% 24.9%
3971074 601.7.1.0 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.58 50.0 3.24e-01 100.0% 21.3%
5065004 2004.11.1.0 a/b three-layered sandwiches › P-loop domains-like › PEP carboxykinase N-terminal domain › PEP carboxykinase N-terminal domain 0.58 47.0 3.08e-01 90.0% 93.3%
143797 101.1.2.149 alpha arrays › HTH › HTH › winged helix domain › Costars 0.58 44.0 3.85e-01 84.0% 53.1%
5074949 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 48.0 3.98e-01 94.0% 92.2%
3588934 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.57 39.0 3.69e-01 74.0% 64.6%
4192750 5054.1.1.2 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans 0.57 49.0 3.50e-01 100.0% 82.5%
4999722 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.57 47.0 3.91e-01 96.0% 88.4%
3544534 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.57 48.0 4.21e-01 100.0% 62.5%
3753579 304.48.1.1 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.57 46.0 2.69e-01 100.0% 10.8%
3997739 101.1.2.281 alpha arrays › HTH › HTH › winged helix domain › Tfb2 0.57 43.0 3.09e-01 96.0% 86.2%
4929718 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 41.0 3.48e-01 88.0% 72.4%
3862747 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.56 49.0 4.13e-01 100.0% 62.4%
5077394 101.1.2.927 alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.56 43.0 3.36e-01 86.0% 56.5%
4972751 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.55 47.0 3.72e-01 96.0% 74.3%
3363271 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.55 33.0 3.35e-01 90.0% 58.0%
4961252 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 44.0 3.66e-01 90.0% 79.8%
3505829 101.1.2.507 alpha arrays › HTH › HTH › winged helix domain › HTH_TANC1 0.54 46.0 3.26e-01 94.0% 60.7%
5064344 7584.1.1.1 a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › AMP-binding 0.54 41.0 3.05e-01 90.0% 93.5%
4005987 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.54 45.0 3.48e-01 100.0% 100.0%
5021067 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 46.0 3.58e-01 94.0% 47.6%
4927049 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.53 38.0 3.24e-01 84.0% 81.0%
4167856 101.1.2.280 alpha arrays › HTH › HTH › winged helix domain › HTH_12 0.52 37.0 3.06e-01 74.0% 56.5%
3885052 145.1.1.4 alpha arrays › F-box domain › F-box domain › F-box domain › ASXH 0.52 46.0 3.68e-01 98.0% 76.8%
1138908 2007.6.1.3 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › PGI 0.51 45.0 2.79e-01 100.0% 22.0%