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HQ615693.1__AEC53232.1__SCRM01_286__00286
Bact-VirHQ615693.1__AEC53232.1__SCRM01_286__00286
Identity
- Accession:
- HQ615693 ↗
- Kingdom:
- phage
Quality
84.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Synechococcus_phage_S-CRM01
TaxID: 1026955
Cluster
View cluster (10 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-163
Domain cluster:
rep: IMGVR_UViG_3300025319_000099-3300025319-Ga0209520_100003741__DFULL
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2nrkA00 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.72 | 57.0 | 5.67e-01 | 81.6% | 93.3% |
| 3nybA02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.70 | 45.0 | 5.41e-01 | 78.5% | 95.5% |
| 3b0xA03 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.68 | 42.0 | 5.04e-01 | 76.1% | 94.3% |
| 4wh5A00 | 3.30.460.40 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.63 | 45.0 | 4.61e-01 | 73.6% | 91.8% |
| 4wqkA00 | 3.30.460.40 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.60 | 46.0 | 4.51e-01 | 79.8% | 98.3% |
| 2fclA00 | 3.30.460.40 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.59 | 43.0 | 4.46e-01 | 75.5% | 93.6% |
| 3upsA00 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.56 | 35.0 | 4.18e-01 | 81.0% | 93.5% |
| 3jyyA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.54 | 41.0 | 4.52e-01 | 79.8% | 100.0% |
| 1knyA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.51 | 35.0 | 3.96e-01 | 81.6% | 91.2% |
| 4ebjA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.51 | 37.0 | 4.07e-01 | 81.6% | 93.0% |
| 2dhmA01 | 3.30.300.90 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › BolA-like | 0.51 | 29.0 | 3.65e-01 | 82.2% | 98.9% |
| 1nkiA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.51 | 38.0 | 4.14e-01 | 87.7% | 93.3% |
| 7q5yB01 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.50 | 34.0 | 3.94e-01 | 82.8% | 94.2% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3579770 | 316.1.1.28 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › TUTase | 0.78 | 54.0 | 5.54e-01 | 70.6% | 78.1% |
| 4972596 | 316.1.1.11 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB | 0.76 | 59.0 | 5.95e-01 | 81.0% | 94.5% |
| 150565 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.74 | 52.0 | 5.53e-01 | 70.6% | 82.4% |
| 4481605 | 316.1.1.11 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB | 0.71 | 54.0 | 5.56e-01 | 78.5% | 91.6% |
| 4583055 | 316.1.1.11 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB | 0.71 | 55.0 | 5.64e-01 | 81.0% | 93.1% |
| 3494194 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.71 | 66.0 | 4.75e-01 | 100.0% | 75.4% |
| 5076310 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.66 | 45.0 | 4.64e-01 | 78.5% | 72.3% |
| 3837820 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.66 | 51.0 | 4.83e-01 | 80.4% | 77.4% |
| 5027168 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.64 | 38.0 | 4.73e-01 | 81.6% | 96.0% |
| 3457724 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.63 | 49.0 | 4.68e-01 | 81.0% | 70.0% |
| 5000504 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.58 | 47.0 | 4.59e-01 | 85.3% | 77.7% |
| 3832932 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.58 | 41.0 | 4.26e-01 | 80.4% | 76.1% |
| 5078295 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.58 | 40.0 | 4.43e-01 | 82.2% | 87.7% |
| 3640051 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.58 | 48.0 | 4.30e-01 | 88.3% | 77.3% |
| 3625467 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.57 | 45.0 | 4.68e-01 | 82.8% | 100.0% |
| 4947158 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.57 | 45.0 | 3.98e-01 | 82.2% | 75.2% |
| 5065339 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.57 | 44.0 | 4.02e-01 | 81.6% | 80.5% |
| 4948263 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.56 | 47.0 | 4.41e-01 | 89.6% | 75.1% |
| 3205500 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.56 | 46.0 | 4.15e-01 | 87.1% | 72.0% |
| 4997464 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.56 | 46.0 | 4.02e-01 | 86.5% | 99.2% |
| 4959743 | 316.1.1.39 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF2204 | 0.55 | 43.0 | 4.16e-01 | 82.8% | 82.6% |
| 5030773 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.55 | 42.0 | 4.46e-01 | 79.8% | 92.6% |
| 3606375 | 316.1.1.14 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › LicD | 0.55 | 49.0 | 4.24e-01 | 95.1% | 80.6% |
| 151131 | 316.1.1.21 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Aminoglyc_resit | 0.55 | 45.0 | 4.60e-01 | 88.3% | 89.2% |
| 3207188 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.55 | 45.0 | 4.10e-01 | 87.7% | 70.5% |
| 4977166 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.54 | 38.0 | 4.31e-01 | 81.6% | 95.8% |
| 3206164 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.54 | 45.0 | 3.98e-01 | 87.7% | 75.2% |
| 5063941 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.53 | 40.0 | 3.60e-01 | 79.8% | 96.2% |
| 4086723 | 316.1.1.43 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF294 | 0.53 | 37.0 | 3.84e-01 | 81.0% | 76.1% |
| 5080470 | 316.1.1.21 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Aminoglyc_resit | 0.51 | 45.0 | 3.97e-01 | 95.1% | 83.4% |
| 4022333 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.50 | 37.0 | 4.15e-01 | 80.4% | 98.4% |