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HQ630627.1__AEH03450.1__X__00024

Bact-Vir

HQ630627.1__AEH03450.1__X__00024

Identity

Accession:
HQ630627 ↗
Kingdom:
phage

Quality

76.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Miltoncavirus› Pseudomonas_phage_PhiPA3

TaxID: 998086

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-78
PDB
Domain cluster: rep: NC_070882.1__YP_010660765.1__PP933_gp025__00025__D9-70
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1sjyA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.67 47.0 3.65e-01 73.9% 93.5%
1vwxd00 3.10.440.10 Alpha Beta › Roll › Ribosomal Protein L31e; Chain: W; › Ribosomal protein L31 0.59 49.0 4.42e-01 100.0% 82.2%
5uayA01 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.59 41.0 3.88e-01 72.5% 96.3%
1t9zA00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.58 40.0 3.07e-01 73.9% 67.2%
5xe7A02 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 39.0 3.28e-01 71.0% 71.2%
3ozoA01 3.30.379.10 Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like 0.56 47.0 3.59e-01 100.0% 76.6%
2kuiA02 3.30.10.20 Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › 0.55 43.0 4.38e-01 98.6% 89.7%
4k3bA02 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.55 39.0 3.76e-01 78.3% 90.5%
3d36B01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.54 45.0 3.53e-01 95.7% 93.1%
3ci0J02 2.10.70.20 Mainly Beta › Ribbon › Complement Module; domain 1 › gspk-gspi-gspj complex like domains 0.54 32.0 3.67e-01 97.1% 82.0%
1pu1A00 3.30.300.100 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like 0.54 38.0 3.48e-01 73.9% 56.0%
3qr8A01 2.40.50.230 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Gp5 N-terminal domain 0.54 46.0 4.40e-01 98.6% 81.0%
3vr0A00 3.40.50.10900 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PAC-like subunit 0.53 42.0 3.00e-01 91.3% 38.1%
3r7wA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 34.0 2.60e-01 100.0% 24.7%
1tuhA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 37.0 3.07e-01 75.4% 65.6%
8a57D02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 41.0 3.04e-01 89.9% 42.4%
4k3bA05 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.51 38.0 3.72e-01 81.2% 89.9%
1yguA02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.51 45.0 3.04e-01 100.0% 76.8%
4huzA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.51 38.0 2.92e-01 98.6% 33.1%
2k54A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 37.0 3.12e-01 78.3% 68.3%
2oc3A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.50 44.0 2.96e-01 100.0% 81.0%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3740282 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.66 46.0 2.91e-01 75.4% 14.7%
4586133 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 52.0 5.21e-01 92.8% 100.0%
3488528 221.1.1.163 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › GRHL1_C 0.62 52.0 4.73e-01 95.7% 89.5%
860255 2498.2.1.4 ↗ mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain › Glycohydro_20b2 0.57 48.0 3.62e-01 100.0% 74.6%
3173241 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.56 39.0 2.81e-01 72.5% 33.0%
3987365 896.1.1.4 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › DDE_Tnp_IS66 0.56 33.0 3.21e-01 100.0% 48.8%
3855748 316.1.1.24 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DNA_pol_B_thumb,DNA_pol_B_palm 0.55 46.0 3.35e-01 95.7% 62.6%
3488689 508.1.1.0 ↗ a+b three layers › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain 0.53 37.0 3.02e-01 71.0% 39.1%
3231335 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.53 43.0 3.12e-01 88.4% 48.7%
5049255 2004.1.1.16 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf 0.53 41.0 2.97e-01 82.6% 37.3%
4028844 4188.1.1.1 ↗ a+b complex topology › BB1717-like › BB1717-like › BB1717-like › SRAP 0.52 44.0 3.09e-01 98.6% 30.0%
3471756 316.1.1.40 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_7 0.52 44.0 3.26e-01 100.0% 34.1%
4930381 2.1.1.17 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.51 42.0 3.87e-01 94.2% 80.6%