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HQ630627.1__AEH03524.1__X__00098

Bact-Vir

HQ630627.1__AEH03524.1__X__00098

Identity

Accession:
HQ630627 ↗
Kingdom:
phage

Quality

70.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Miltoncavirus› Pseudomonas_phage_PhiPA3

TaxID: 998086

Cluster

View cluster (33 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 268-496
PDB
Domain cluster: rep: MK552327.1__QBJ02747.1__PSA21_221__00221__D124-386
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF12699.14 best phiKZ_IP 138.6 5.10e-40 97.8% 62.2%
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4wjg400 1.20.1260.80 Mainly Alpha › Up-down Bundle › Ferritin › 0.68 37.0 3.54e-01 97.4% 45.2%
3uumA00 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.68 36.0 4.90e-01 72.5% 96.7%
1vctA01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.66 28.0 4.08e-01 85.2% 84.4%
2v0xA01 1.10.287.3160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.65 41.0 4.81e-01 93.4% 86.3%
5j1gA00 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 38.0 3.84e-01 74.2% 57.0%
2b5uA02 1.10.287.620 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins 0.63 34.0 3.96e-01 98.7% 72.0%
1t98A02 1.20.58.590 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain 0.62 44.0 5.07e-01 84.3% 100.0%
1sumB01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.62 30.0 4.33e-01 79.9% 99.1%
1io1A01 1.20.1330.10 Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain 0.58 42.0 4.83e-01 96.1% 100.0%
4nqiD00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.54 37.0 3.77e-01 100.0% 69.0%
6i3mE01 1.20.120.420 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 0.53 24.0 3.07e-01 84.3% 68.6%
3zciA00 1.20.58.1660 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 41.0 4.49e-01 80.3% 96.9%
2v7kA02 1.20.58.480 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 41.0 4.22e-01 80.8% 88.8%
6vq6H01 1.10.287.3240 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.51 36.0 3.79e-01 97.4% 78.4%
1fntc01 1.20.120.180 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Proteasome activator pa28, C-terminal domain 0.51 39.0 4.27e-01 89.1% 94.7%
3gs3A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.51 28.0 2.73e-01 70.3% 46.2%
3vkgA12 1.10.287.2610 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.50 37.0 3.90e-01 98.7% 80.9%
3qa8A04 1.20.1270.250 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.50 35.0 3.49e-01 98.7% 68.7%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3179076 604.7.1.1 ↗ alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA 0.70 32.0 4.14e-01 87.8% 73.8%
4974110 3755.4.1.91 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › DUF7121 0.67 37.0 3.78e-01 99.1% 53.9%
4963649 3755.1.1.0 ↗ alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related 0.60 35.0 3.22e-01 98.7% 42.6%
3699468 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.57 38.0 4.09e-01 99.1% 77.5%
5023516 3922.1.1.269 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Rad50_zn_hook 0.56 35.0 3.51e-01 99.1% 59.1%
3999040 150.1.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.55 40.0 4.65e-01 83.4% 100.0%
4998688 192.2.1.89 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › DUF7121 0.55 38.0 3.75e-01 99.1% 65.3%
3880244 603.2.1.24 ↗ alpha bundles › STAT-like › STAT › STAT › TBCA_PH 0.54 36.0 4.29e-01 70.7% 97.4%
3715005 604.8.1.0 ↗ alpha bundles › Spectrin repeat-like › Smac/diablo › Smac/diablo 0.54 37.0 4.38e-01 70.3% 99.4%
3693035 603.1.1.19 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-18_N 0.54 42.0 4.02e-01 81.7% 86.5%
3210030 150.1.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.53 47.0 4.86e-01 97.4% 100.0%
3228061 1147.1.1.1 ↗ alpha bundles › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › Occludin_ELL 0.52 28.0 3.65e-01 93.4% 92.2%
3724523 4121.1.1.7 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › PF26616 0.51 44.0 3.71e-01 91.3% 56.9%
3763198 5001.1.1.1 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.51 46.0 3.97e-01 96.5% 80.9%
D2 medium residues 127-267
PDB
Domain cluster: rep: HQ630627.1__AEH03522.1__X__00096__D37-137
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF12699.14 best phiKZ_IP 113.9 1.60e-32 99.3% 33.2%