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HQ630627.1__AEH03619.1__X__00193
Bact-VirHQ630627.1__AEH03619.1__X__00193
Identity
- Accession:
- HQ630627 ↗
- Kingdom:
- phage
Quality
68.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Chimalliviridae›
Miltoncavirus›
Pseudomonas_phage_PhiPA3
TaxID: 998086
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-92
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1y96A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 41.0 | 4.23e-01 | 75.6% | 84.9% |
| 1ospO02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.55 | 39.0 | 3.38e-01 | 73.3% | 80.1% |
| 1ei5A03 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 41.0 | 4.01e-01 | 82.2% | 79.4% |
| 2hx0A01 | 3.30.1330.80 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 | 0.54 | 45.0 | 3.99e-01 | 93.3% | 75.8% |
| 2dk3A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 40.0 | 4.11e-01 | 85.6% | 93.0% |
| 3m4aA03 | 3.90.15.10 | Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 | 0.52 | 39.0 | 3.62e-01 | 81.1% | 88.1% |
| 2ichA02 | 2.40.370.10 | Mainly Beta › Beta Barrel › AttH-like fold › AttH-like domain | 0.52 | 37.0 | 3.31e-01 | 74.4% | 80.8% |
| 3ge2A00 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 40.0 | 4.03e-01 | 84.4% | 98.9% |
| 1e69A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 41.0 | 3.07e-01 | 93.3% | 41.4% |
| 5gtqA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.50 | 38.0 | 2.73e-01 | 84.4% | 98.7% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3216714 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 29.0 | 4.13e-01 | 72.2% | 100.0% |
| 5025079 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 37.0 | 4.40e-01 | 85.6% | 100.0% |
| 3907176 | 4.1.1.248 ↗ | beta barrels › SH3 › SH3 › SH3 › CABIT | 0.58 | 47.0 | 4.75e-01 | 87.8% | 96.7% |
| 4204975 | 12.3.1.14 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Hepar_II_III | 0.57 | 39.0 | 2.71e-01 | 72.2% | 81.1% |
| 3546306 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.56 | 39.0 | 3.83e-01 | 71.1% | 73.7% |
| 3346536 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.56 | 39.0 | 3.39e-01 | 73.3% | 79.3% |
| 3268736 | 2004.1.1.433 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 | 0.55 | 49.0 | 3.08e-01 | 100.0% | 90.1% |
| 3623607 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.55 | 38.0 | 3.38e-01 | 73.3% | 80.0% |
| 3798354 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.55 | 38.0 | 3.40e-01 | 73.3% | 85.2% |
| 1349043 | 5.1.3.33 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF5074 | 0.55 | 38.0 | 2.63e-01 | 72.2% | 56.1% |
| 3207947 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.55 | 38.0 | 2.48e-01 | 72.2% | 60.2% |
| 3239992 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.54 | 37.0 | 3.00e-01 | 70.0% | 83.2% |
| 3865654 | 220.1.1.52 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SNX17_FERM_C | 0.54 | 38.0 | 3.49e-01 | 73.3% | 80.8% |
| 4003717 | 4.1.1.50 ↗ | beta barrels › SH3 › SH3 › SH3 › MIB_HERC2 | 0.54 | 39.0 | 4.24e-01 | 77.8% | 97.3% |
| 5035008 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.53 | 42.0 | 3.48e-01 | 85.6% | 90.9% |
| 134104 | 9.1.1.22 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF3642 | 0.51 | 40.0 | 4.03e-01 | 84.4% | 98.9% |
| 4079885 | 274.1.1.25 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › ComGF | 0.51 | 36.0 | 3.56e-01 | 73.3% | 90.5% |
| 4857588 | 219.1.1.6 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 | 0.51 | 38.0 | 2.85e-01 | 80.0% | 76.9% |
| 5006258 | 205.1.1.128 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › APS-reductase_C | 0.50 | 35.0 | 3.03e-01 | 72.2% | 70.3% |