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HQ630627.1__AEH03789.1__X__00363

Bact-Vir

HQ630627.1__AEH03789.1__X__00363

Identity

Accession:
HQ630627 ↗
Kingdom:
phage

Quality

79.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Miltoncavirus› Pseudomonas_phage_PhiPA3

TaxID: 998086

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-109
PDB
Domain cluster: rep: MF356679.1__ASR76351.1__D6_51__00051__D200-299
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2mj7A00 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.62 51.0 4.62e-01 89.6% 66.0%
1pzdA02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.61 48.0 4.70e-01 85.8% 77.4%
2ldkA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 52.0 4.42e-01 93.4% 91.9%
3qnfC01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.60 41.0 3.34e-01 100.0% 36.1%
2qpvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 50.0 4.68e-01 90.6% 93.9%
3eliA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 50.0 4.59e-01 92.5% 97.9%
2ya0A03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.59 37.0 3.76e-01 100.0% 63.5%
2il5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 49.0 4.27e-01 92.5% 93.8%
3dpuB03 3.30.310.200 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.58 45.0 4.53e-01 92.5% 81.5%
3rwxA01 2.40.128.340 Mainly Beta › Beta Barrel › Lipocalin › 0.58 42.0 4.09e-01 77.4% 96.7%
3pu2B00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 48.0 4.30e-01 92.5% 97.4%
3otlA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 47.0 4.23e-01 93.4% 94.8%
4fpwB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 48.0 4.19e-01 94.3% 84.5%
1t17A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 46.0 4.16e-01 92.5% 94.6%
4qrlA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.55 38.0 3.80e-01 71.7% 99.1%
1mpgA01 3.30.310.20 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain 0.53 46.0 4.52e-01 92.5% 94.6%
6u5uG07 3.30.1120.100 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.53 39.0 3.63e-01 76.4% 78.8%
3ebwA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 37.0 3.44e-01 73.6% 73.9%
3ugfB02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.53 46.0 3.96e-01 100.0% 98.3%
2xg5A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 34.0 3.57e-01 99.1% 76.1%
2g1lA00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.51 36.0 3.64e-01 72.6% 100.0%
2o62A01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 38.0 3.60e-01 80.2% 95.4%
1qwdB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 43.0 3.81e-01 97.2% 80.1%
2h36X00 3.30.160.300 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 41.0 4.09e-01 87.7% 85.2%
3ge2A00 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.51 39.0 4.16e-01 84.9% 98.9%
3u2aA00 3.30.450.310 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.50 38.0 3.75e-01 87.7% 75.9%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3509038 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.62 49.0 5.05e-01 90.6% 89.0%
1140712 331.9.1.2 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › B2-adapt-app_C 0.62 51.0 4.77e-01 90.6% 72.3%
3887495 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.61 49.0 4.79e-01 91.5% 78.3%
3237828 331.9.1.9 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › PF26171 0.61 46.0 4.63e-01 92.5% 77.3%
3742764 4081.1.1.5 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.61 41.0 3.26e-01 100.0% 34.3%
3947246 331.3.1.19 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VanA_C 0.60 51.0 4.15e-01 93.4% 78.5%
4026594 331.9.1.2 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › B2-adapt-app_C 0.59 49.0 4.78e-01 90.6% 81.4%
146365 5084.7.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Hypothetical bacterial outer membrane protein (BF2706) › Hypothetical bacterial outer membrane protein (BF2706) 0.58 42.0 4.11e-01 77.4% 97.5%
4598668 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.58 43.0 4.73e-01 89.6% 97.6%
3173796 331.1.1.5 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N 0.57 42.0 4.57e-01 86.8% 95.3%
5023617 4111.1.1.2 ↗ a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC 0.57 49.0 4.51e-01 100.0% 74.1%
3736590 9.14.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W 0.55 40.0 4.12e-01 75.5% 80.0%
3927305 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 39.0 3.90e-01 73.6% 93.6%
3946522 9.1.1.36 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF3833 0.55 43.0 3.86e-01 85.8% 96.1%
3713198 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.54 42.0 3.73e-01 84.0% 61.9%
3782254 12.3.1.9 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_81 0.52 39.0 2.82e-01 80.2% 79.4%
3489061 223.1.1.71 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › VGCC_alpha2 0.52 40.0 3.57e-01 82.1% 69.0%
4976692 844.1.1.0 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain 0.52 46.0 3.58e-01 100.0% 61.2%
4054729 330.4.1.1 ↗ a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.52 34.0 3.84e-01 87.7% 94.7%
3482586 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.51 39.0 3.75e-01 81.1% 80.8%
3503123 3338.2.1.0 ↗ a+b two layers › Fragilysin-3 prodomain-like › Type II secretion chaperone CpaB › Type II secretion chaperone CpaB 0.51 38.0 3.70e-01 79.2% 89.2%
164598 331.15.1.1 ↗ a+b two layers › TBP-like › Anti-CRISPR protein AcrID1 › Anti-CRISPR protein AcrID1 › DUF1374 0.51 41.0 4.09e-01 87.7% 85.2%