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HQ632825.1__AGN12198.1__PRTG_00040__00040
Bact-VirHQ632825.1__AGN12198.1__PRTG_00040__00040
Identity
- Accession:
- HQ632825 ↗
- Kingdom:
- phage
Quality
70.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Salacisavirus›
Prochlorococcus_phage_P-SSM5
TaxID: 536454
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-47
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3b40A02 | 1.10.287.650 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › L27 domain | 0.67 | 46.0 | 4.21e-01 | 88.6% | 55.2% |
| 3r5dA02 | 3.30.60.70 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Trimeric LpxA-like enzymes | 0.63 | 42.0 | 4.34e-01 | 100.0% | 70.7% |
| 7r97A02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.59 | 46.0 | 3.99e-01 | 86.4% | 64.7% |
| 3do8A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.55 | 44.0 | 3.24e-01 | 93.2% | 54.1% |
| 4m6rA00 | 3.40.225.10 | Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain | 0.55 | 43.0 | 2.90e-01 | 100.0% | 78.1% |
| 1jyaB00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.54 | 37.0 | 2.88e-01 | 86.4% | 27.3% |
| 4uuwA01 | 3.40.980.10 | Alpha Beta › 3-Layer(aba) Sandwich › Molybdenum Cofactor Biosythetic Enzyme; Chain A › MoaB/Mog-like domain | 0.51 | 40.0 | 2.83e-01 | 97.7% | 39.0% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4034096 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 53.0 | 4.31e-01 | 86.4% | 41.2% |
| 3590624 | 101.1.2.92 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_11 | 0.71 | 49.0 | 4.10e-01 | 90.9% | 41.2% |
| None | — | 0.61 | 46.0 | 2.69e-01 | 88.6% | 38.5% | |
| 2523982 | 7568.1.1.0 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain | 0.60 | 51.0 | 3.80e-01 | 93.2% | 60.0% |
| 4062902 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.60 | 48.0 | 2.76e-01 | 95.5% | 37.6% |
| None | — | 0.59 | 46.0 | 2.67e-01 | 90.9% | 38.7% | |
| 3279263 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.56 | 48.0 | 3.28e-01 | 100.0% | 28.8% |
| 3287483 | 213.1.1.68 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Rv0428c_C | 0.56 | 44.0 | 3.48e-01 | 97.7% | 41.1% |
| None | — | 0.52 | 44.0 | 3.76e-01 | 95.5% | 58.6% | |
| 4393386 | 101.1.2.5 ↗ | alpha arrays › HTH › HTH › winged helix domain › Crp | 0.51 | 42.0 | 3.42e-01 | 100.0% | 48.2% |