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HQ632859.1__AGH31473.1__LOKG_00037__00036
Bact-VirHQ632859.1__AGH31473.1__LOKG_00037__00036
Identity
- Accession:
- HQ632859 ↗
- Kingdom:
- phage
Quality
84.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Casjensviridae›
Broinstvirus›
Loktanella_phage_pCB2051-A
TaxID: 754044
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-70
Domain cluster:
rep: OL964754.1__UIS24837.1__pAEv1812_28__00028__D3-65
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ceiA01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.62 | 44.0 | 4.54e-01 | 94.0% | 81.0% |
| 4f0uA00 | 1.10.490.20 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins | 0.58 | 50.0 | 3.84e-01 | 100.0% | 58.7% |
| 2y44A00 | 1.20.1260.80 | Mainly Alpha › Up-down Bundle › Ferritin › | 0.57 | 48.0 | 3.65e-01 | 100.0% | 85.3% |
| 1cfzA00 | 3.40.50.1450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HybD-like | 0.57 | 46.0 | 3.52e-01 | 91.0% | 65.4% |
| 2kmuA00 | 1.10.10.1460 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.55 | 37.0 | 4.00e-01 | 82.1% | 83.9% |
| 2rg8A00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.55 | 40.0 | 3.12e-01 | 77.6% | 68.0% |
| 2dbdA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.55 | 43.0 | 3.79e-01 | 89.6% | 90.7% |
| 2bi7A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 45.0 | 3.20e-01 | 97.0% | 98.0% |
| 4okmD00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.52 | 42.0 | 2.78e-01 | 92.5% | 37.7% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3629785 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.80 | 45.0 | 2.67e-01 | 95.5% | 8.0% |
| 4069561 | 3281.1.1.1 ↗ | alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M | 0.70 | 57.0 | 3.44e-01 | 91.0% | 30.4% |
| 3406329 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.60 | 47.0 | 3.44e-01 | 89.6% | 93.8% |
| 3380639 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 48.0 | 2.89e-01 | 88.1% | 90.3% |
| 3981167 | 4995.1.1.3 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › MlrA_helical | 0.54 | 51.0 | 4.88e-01 | 100.0% | 92.0% |
| 5052849 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.54 | 42.0 | 4.38e-01 | 91.0% | 93.3% |
| 3305107 | 131.1.1.5 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD,HD_assoc_2 | 0.53 | 44.0 | 2.69e-01 | 92.5% | 47.4% |
| 3197498 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 38.0 | 2.87e-01 | 77.6% | 56.4% |