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HQ633071.1__AGH31520.1__SWZG_00007__00007

Bact-Vir

HQ633071.1__AGH31520.1__SWZG_00007__00007

Identity

Accession:
HQ633071 ↗
Kingdom:
phage

Quality

87.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Llyrvirus› Synechococcus_phage_S-SKS1

TaxID: 754042

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 26-213
PDB
Domain cluster: rep: MN136198.2__QEM43051.1__AC4HA13_0076__00076__D266-456
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13385.14 best Laminin_G_3 79.3 4.70e-22 76.6% 92.0%
D2 medium residues 267-330
PDB
Domain cluster: rep: putative_concanavalin_A-like_lectin_glucanase_superfamily_protein__YP_009052454__Aureococcus_anophagefferens_virus__1474867__D338-393
D3 medium residues 331-379_420-430
PDB
Domain cluster: representative
D4 medium residues 380-419_431-470
PDB
Domain cluster: rep: NC_055915.1__YP_010114634.1__KNV73_gp049__00222__D362-404_434-458
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4pbpA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.83 76.0 5.47e-01 97.5% 67.0%
3flpA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.83 76.0 5.37e-01 97.5% 68.7%
3pvnA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.82 76.0 5.47e-01 98.8% 67.5%
4dqaA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.76 69.0 4.96e-01 97.5% 71.1%
2jkbA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.74 67.0 5.03e-01 100.0% 52.1%
8b55A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.72 61.0 4.68e-01 92.5% 44.1%
2sliA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.72 65.0 4.86e-01 100.0% 51.5%
2psbA00 3.50.90.10 Alpha Beta › 3-Layer(bba) Sandwich › YerB-like fold › YerB-like 0.63 44.0 3.03e-01 73.8% 85.9%
4xw3A00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.59 46.0 3.50e-01 83.7% 40.5%
4p9iA00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.59 46.0 3.65e-01 83.7% 51.5%
1d5cA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 45.0 3.70e-01 87.5% 100.0%
1neiA00 3.30.160.220 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YoaG 0.56 30.0 3.51e-01 75.0% 71.7%
5cxxB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.55 46.0 3.26e-01 96.2% 90.5%
4rg1A01 3.40.1280.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain 0.54 43.0 3.35e-01 90.0% 99.0%
2wujA00 6.10.250.660 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.54 27.0 3.18e-01 90.0% 70.0%
3t38A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 41.0 3.63e-01 88.7% 100.0%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1317200 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.83 68.0 4.79e-01 86.3% 41.9%
3702424 10.1.1.56 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C 0.80 70.0 5.90e-01 92.5% 73.6%
1162823 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.78 72.0 5.17e-01 100.0% 71.6%
4940720 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.77 71.0 4.37e-01 100.0% 28.9%
3701432 10.1.1.56 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C 0.76 67.0 6.01e-01 96.2% 85.5%
2982808 10.1.1.5 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Pentaxin 0.70 62.0 4.66e-01 97.5% 54.9%
3791045 10.1.1.8 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.59 45.0 3.76e-01 82.5% 57.1%
3995842 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.57 48.0 3.65e-01 92.5% 51.0%
3412122 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.57 45.0 3.51e-01 90.0% 85.6%
4886985 7523.1.1.16 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › DctP 0.51 29.0 2.47e-01 86.3% 35.2%
3560257 5.1.4.6 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 0.51 41.0 2.74e-01 91.3% 91.3%
3486642 3257.1.1.1 ↗ a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.50 39.0 2.94e-01 86.3% 48.8%