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HQ633071.1__AGH31565.1__SWZG_00052__00052
Bact-VirHQ633071.1__AGH31565.1__SWZG_00052__00052
Identity
- Accession:
- HQ633071 ↗
- Kingdom:
- phage
Quality
96.2
mean pLDDT
Taxonomy
TaxID: 754042
Cluster
View cluster (11 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-116_271-280
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1uswA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.66 | 50.0 | 3.92e-01 | 79.7% | 90.4% |
| 1ypfA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.64 | 47.0 | 3.54e-01 | 77.2% | 63.4% |
| 4f1jA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.61 | 53.0 | 4.62e-01 | 98.4% | 91.5% |
| 8b73B01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.60 | 44.0 | 3.29e-01 | 76.4% | 76.9% |
| 4pyrA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 52.0 | 4.64e-01 | 98.4% | 74.7% |
| 6yttA02 | 3.40.50.2030 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 52.0 | 4.72e-01 | 98.4% | 87.6% |
| 2amlB01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.58 | 49.0 | 4.11e-01 | 92.7% | 76.5% |
| 1mjgM02 | 3.40.50.2030 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 53.0 | 4.60e-01 | 100.0% | 96.7% |
| 1f8fA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 48.0 | 4.64e-01 | 88.6% | 87.6% |
| 6pf8A01 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.56 | 39.0 | 3.49e-01 | 71.5% | 55.7% |
| 4ldpA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.53 | 46.0 | 4.24e-01 | 98.4% | 72.4% |
| 3v8bC00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 47.0 | 3.73e-01 | 98.4% | 89.0% |
| 1frvA01 | 3.40.50.700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NADH:ubiquinone oxidoreductase-like, 20kDa subunit | 0.53 | 47.0 | 4.17e-01 | 98.4% | 85.9% |
| 4eukA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 47.0 | 4.55e-01 | 98.4% | 90.4% |
| 5agaA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 40.0 | 3.41e-01 | 82.1% | 68.9% |
| 3qw4B02 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 41.0 | 3.58e-01 | 84.6% | 77.1% |
| 3eshA01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.52 | 45.0 | 3.62e-01 | 98.4% | 73.7% |
| 1k4kB00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.52 | 43.0 | 3.72e-01 | 92.7% | 78.4% |
| 4a8jB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 41.0 | 3.45e-01 | 88.6% | 76.4% |
| 1gnlA03 | 3.40.50.2030 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 45.0 | 4.23e-01 | 100.0% | 80.8% |
| 2w3pA02 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.51 | 45.0 | 3.72e-01 | 100.0% | 96.1% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4097294 | 2006.1.6.39 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Mat89Bb | 0.65 | 58.0 | 4.58e-01 | 98.4% | 97.3% |
| 3782981 | 2003.6.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin | 0.62 | 56.0 | 4.04e-01 | 98.4% | 69.0% |
| 3975609 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.60 | 41.0 | 4.50e-01 | 100.0% | 88.0% |
| 3724591 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.59 | 53.0 | 4.44e-01 | 100.0% | 87.4% |
| 3557980 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.59 | 53.0 | 4.55e-01 | 98.4% | 89.7% |
| 4991302 | 7584.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › AMP-binding | 0.59 | 50.0 | 4.13e-01 | 91.9% | 66.0% |
| 4295510 | 7501.1.1.1 ↗ | a/b three-layered sandwiches › Dihydrofolate reductases › Dihydrofolate reductases › Dihydrofolate reductases › DHFR_1 | 0.57 | 40.0 | 3.71e-01 | 72.4% | 56.2% |
| 5057714 | 7534.1.1.1 ↗ | a/b three-layered sandwiches › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Prenyltransf | 0.56 | 49.0 | 4.07e-01 | 97.6% | 92.4% |
| 3199753 | 2002.1.1.33 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_20 | 0.55 | 49.0 | 3.24e-01 | 100.0% | 59.6% |
| 3366220 | 2004.1.1.135 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PIF1 | 0.54 | 41.0 | 3.84e-01 | 82.9% | 83.7% |
| 3954527 | 7514.1.1.2 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › SIP | 0.53 | 41.0 | 3.84e-01 | 83.7% | 88.6% |
| 3688286 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 43.0 | 3.99e-01 | 92.7% | 95.2% |
| 3741098 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.51 | 42.0 | 3.00e-01 | 89.4% | 39.0% |
| 4030700 | 2004.1.1.292 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AFG1_ATPase | 0.51 | 39.0 | 3.44e-01 | 82.9% | 68.4% |
| 4240605 | 7512.1.1.20 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › EryCIII-like_C | 0.51 | 45.0 | 4.09e-01 | 98.4% | 75.2% |
| 3291001 | 7514.1.1.2 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › SIP | 0.50 | 41.0 | 3.98e-01 | 89.4% | 86.0% |
| 4958149 | 2007.2.5.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Rhodanese/Cell cycle control phosphatase › Rhodanese | 0.50 | 37.0 | 3.84e-01 | 76.4% | 91.3% |
D2
high
residues 131-269
Domain cluster:
rep: IMGVR_UViG_3300025840_006347-3300025840-Ga0208917_10015349__D93-249
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03016.21 best | Exostosin_GT47 | 67.9 | 1.30e-18 | 84.9% | 38.8% |
| PF24785.2 | RXYLT1_C | 32.2 | 1.00e-07 | 65.5% | 38.8% |