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HQ633071.1__AGH31605.1__SWZG_00092__00092
Bact-VirHQ633071.1__AGH31605.1__SWZG_00092__00092
Identity
- Accession:
- HQ633071 ↗
- Kingdom:
- phage
Quality
65.9
mean pLDDT
Taxonomy
TaxID: 754042
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-83
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1cbyA00 | 3.40.198.10 | Alpha Beta › 3-Layer(aba) Sandwich › Delta-endotoxin CytB › Delta-endotoxin CytB-like | 0.72 | 54.0 | 3.65e-01 | 79.7% | 46.7% |
| 3o4yA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.69 | 60.0 | 5.08e-01 | 100.0% | 77.3% |
| 1tqnA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.68 | 57.0 | 3.42e-01 | 95.3% | 66.2% |
| 3qqaA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.68 | 50.0 | 5.13e-01 | 95.3% | 86.4% |
| 2aj6A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.66 | 45.0 | 3.63e-01 | 75.0% | 37.5% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.65 | 47.0 | 4.40e-01 | 95.3% | 62.3% |
| 6nmnA02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.65 | 49.0 | 3.91e-01 | 81.2% | 49.2% |
| 2vk9A04 | 1.10.274.80 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › | 0.62 | 54.0 | 4.64e-01 | 98.4% | 64.4% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.61 | 47.0 | 4.68e-01 | 81.2% | 83.1% |
| 3umbA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.61 | 50.0 | 4.75e-01 | 96.9% | 91.1% |
| 2l35A00 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.60 | 44.0 | 4.52e-01 | 95.3% | 79.4% |
| 3cqcB01 | 1.20.58.1380 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 48.0 | 4.31e-01 | 87.5% | 63.3% |
| 2cazD00 | 6.10.140.820 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 45.0 | 4.65e-01 | 90.6% | 85.0% |
| 2wauA02 | 1.20.58.830 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 52.0 | 4.22e-01 | 100.0% | 81.1% |
| 6t0bc01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 42.0 | 3.95e-01 | 87.5% | 62.8% |
| 1b5lA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.58 | 50.0 | 3.79e-01 | 95.3% | 95.4% |
| 2mtqA00 | 1.20.58.130 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 44.0 | 4.20e-01 | 96.9% | 69.9% |
| 2q0oC00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.58 | 46.0 | 4.12e-01 | 84.4% | 64.0% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.57 | 45.0 | 3.87e-01 | 89.1% | 90.9% |
| 3safA02 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.57 | 41.0 | 3.67e-01 | 79.7% | 77.0% |
| 3d36B02 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.56 | 40.0 | 4.10e-01 | 95.3% | 78.7% |
| 1h7cA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 51.0 | 4.29e-01 | 98.4% | 96.1% |
| 2lvfA00 | 1.10.110.10 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins | 0.56 | 49.0 | 4.10e-01 | 100.0% | 78.9% |
| 4finB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 48.0 | 3.24e-01 | 100.0% | 75.7% |
| 3lmfA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.55 | 43.0 | 3.71e-01 | 89.1% | 89.9% |
| 1e1dA02 | 1.20.1270.20 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.55 | 47.0 | 4.30e-01 | 93.8% | 71.4% |
| 1b06A01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.54 | 43.0 | 4.27e-01 | 84.4% | 82.1% |
| 2o4cA03 | 3.30.1370.170 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Erythronate-4-phosphate dehydrogenase, dimerisation domain | 0.54 | 36.0 | 3.36e-01 | 85.9% | 52.3% |
| 2v6eA01 | 1.10.287.3180 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 46.0 | 4.35e-01 | 93.8% | 92.0% |
| 2r5sA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.54 | 41.0 | 3.74e-01 | 89.1% | 61.4% |
| 4gf0A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.53 | 46.0 | 3.89e-01 | 100.0% | 85.0% |
| 2d8dB00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.53 | 46.0 | 4.24e-01 | 96.9% | 77.1% |
| 4i17A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.52 | 46.0 | 3.21e-01 | 100.0% | 32.6% |
| 1lvfB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 46.0 | 3.93e-01 | 98.4% | 88.5% |
| 3rq9A00 | 1.10.287.2500 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 43.0 | 4.05e-01 | 92.2% | 85.9% |
| 2ficB00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.51 | 46.0 | 3.23e-01 | 100.0% | 78.6% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5044192 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.79 | 69.0 | 4.09e-01 | 96.9% | 17.1% |
| 5053768 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.73 | 61.0 | 3.72e-01 | 92.2% | 15.8% |
| 3882597 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.70 | 53.0 | 4.68e-01 | 79.7% | 62.2% |
| 3494078 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 56.0 | 5.65e-01 | 95.3% | 87.7% |
| 3928688 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.69 | 47.0 | 4.70e-01 | 70.3% | 98.5% |
| 3404325 | 102.1.1.2 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HRDC | 0.68 | 50.0 | 4.71e-01 | 79.7% | 100.0% |
| 5005176 | 604.15.1.0 ↗ | alpha bundles › Spectrin repeat-like › Efb C-domain-like › Efb C-domain-like | 0.67 | 43.0 | 4.28e-01 | 95.3% | 63.1% |
| 3314379 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.67 | 60.0 | 5.88e-01 | 100.0% | 98.6% |
| 3487880 | 5063.1.1.0 ↗ | alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK | 0.67 | 49.0 | 4.90e-01 | 79.7% | 76.9% |
| 3954729 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.66 | 48.0 | 4.64e-01 | 95.3% | 68.0% |
| 3238428 | 181.1.1.0 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins | 0.65 | 51.0 | 4.79e-01 | 93.8% | 70.0% |
| 3212814 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.63 | 56.0 | 3.93e-01 | 100.0% | 40.5% |
| 5055663 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.62 | 55.0 | 4.32e-01 | 96.9% | 53.8% |
| 4946455 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.61 | 46.0 | 4.27e-01 | 95.3% | 63.7% |
| 3780651 | 3602.1.1.0 ↗ | alpha bundles › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain | 0.61 | 47.0 | 4.76e-01 | 90.6% | 80.0% |
| 3937443 | 3198.1.1.1 ↗ | alpha bundles › ABA-1 repeat unit › ABA-1 repeat unit › ABA-1 repeat unit › NPA | 0.61 | 52.0 | 4.27e-01 | 98.4% | 98.4% |
| 3286379 | 633.6.1.0 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like | 0.60 | 52.0 | 4.20e-01 | 96.9% | 51.2% |
| 4953311 | 604.20.1.0 ↗ | alpha bundles › Spectrin repeat-like › C-terminal domain in hypothetical protein BACOVA_03992 › C-terminal domain in hypothetical protein BACOVA_03992 | 0.60 | 53.0 | 4.61e-01 | 100.0% | 66.0% |
| 3174920 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.58 | 41.0 | 3.85e-01 | 76.6% | 62.4% |
| 1933314 | 1134.1.1.0 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain | 0.57 | 49.0 | 4.67e-01 | 93.8% | 81.6% |
| 2858351 | 1128.1.1.2 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR_2 | 0.57 | 42.0 | 3.47e-01 | 79.7% | 44.0% |
| 3177211 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.57 | 41.0 | 3.84e-01 | 81.2% | 65.9% |
| 4020513 | 109.4.1.447 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PI4K_N | 0.56 | 45.0 | 2.82e-01 | 89.1% | 32.6% |
| 4954045 | 632.19.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A | 0.56 | 48.0 | 4.69e-01 | 93.8% | 85.5% |
| 3646270 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.54 | 48.0 | 4.49e-01 | 95.3% | 78.7% |
| 3398253 | 601.4.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › NIT | 0.54 | 48.0 | 3.84e-01 | 100.0% | 60.8% |
| 3398320 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.54 | 46.0 | 4.45e-01 | 93.8% | 84.3% |
| 3619724 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.53 | 49.0 | 4.16e-01 | 100.0% | 77.0% |
| 3714313 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.53 | 42.0 | 3.62e-01 | 87.5% | 83.8% |
| 3876247 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.53 | 47.0 | 3.83e-01 | 100.0% | 82.5% |
| 3504303 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.52 | 46.0 | 3.89e-01 | 93.8% | 84.0% |
D2
high
residues 257-306
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1q8kA03 | 3.30.70.1130 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › EIF_2_alpha | 0.71 | 60.0 | 4.69e-01 | 100.0% | 75.9% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.69 | 59.0 | 4.16e-01 | 100.0% | 47.9% |
| 1x60A01 | 3.30.70.1070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat | 0.69 | 62.0 | 5.44e-01 | 100.0% | 97.2% |
| 1ln0A00 | 3.40.1440.10 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.67 | 51.0 | 4.28e-01 | 86.0% | 96.7% |
| 3ffjA04 | 2.60.40.4040 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.65 | 45.0 | 3.49e-01 | 98.0% | 29.9% |
| 3egrA00 | 3.10.20.520 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phenylacetic acid degradation B | 0.65 | 54.0 | 5.10e-01 | 100.0% | 81.0% |
| 5z06B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 50.0 | 4.22e-01 | 100.0% | 48.9% |
| 3gmgA00 | 3.30.70.1880 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Protein of unknown function DUF881 | 0.64 | 51.0 | 3.89e-01 | 100.0% | 74.8% |
| 1x4xA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 48.0 | 3.89e-01 | 100.0% | 40.6% |
| 6kjcA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.62 | 46.0 | 2.77e-01 | 84.0% | 38.7% |
| 2ahoB03 | 3.30.70.1130 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › EIF_2_alpha | 0.62 | 46.0 | 4.01e-01 | 88.0% | 100.0% |
| 2o3iA01 | 3.40.1610.10 | Alpha Beta › 3-Layer(aba) Sandwich › CV3147-like fold › CV3147-like domain | 0.62 | 52.0 | 3.43e-01 | 100.0% | 24.2% |
| 2hw4A01 | 3.50.20.20 | Alpha Beta › 3-Layer(bba) Sandwich › Pyruvoyl-Dependent Histidine Decarboxylase; Chain B › Janus/Ocnus | 0.61 | 51.0 | 4.06e-01 | 98.0% | 60.9% |
| 1x3dA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 45.0 | 3.64e-01 | 100.0% | 37.3% |
| 2vfkA00 | 3.90.1140.10 | Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase | 0.61 | 48.0 | 3.34e-01 | 98.0% | 87.8% |
| 2qmwA03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.60 | 48.0 | 4.31e-01 | 96.0% | 100.0% |
| 1rlhA02 | 3.40.1520.10 | Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1634 › Ta1353-like | 0.59 | 50.0 | 4.03e-01 | 98.0% | 99.0% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.58 | 48.0 | 4.07e-01 | 98.0% | 55.4% |
| 3w42A00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.58 | 47.0 | 3.31e-01 | 100.0% | 28.6% |
| 1kvkA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.58 | 48.0 | 3.57e-01 | 100.0% | 97.3% |
| 1wgyA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 38.0 | 3.48e-01 | 100.0% | 47.4% |
| 3on7B00 | 2.60.120.330 | Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain | 0.56 | 43.0 | 2.81e-01 | 90.0% | 63.3% |
| 4fixA01 | 3.90.550.60 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › | 0.55 | 45.0 | 2.72e-01 | 96.0% | 22.8% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.54 | 44.0 | 3.97e-01 | 98.0% | 67.1% |
| 2xomA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 43.0 | 3.30e-01 | 100.0% | 51.7% |
| 6a6yA00 | 2.60.40.1490 | Mainly Beta › Sandwich › Immunoglobulin-like › Histone chaperone ASF1-like | 0.51 | 43.0 | 3.14e-01 | 100.0% | 42.1% |
| 2nytD00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.50 | 43.0 | 3.02e-01 | 100.0% | 53.1% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3954708 | 4325.1.1.9 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › PF26003 | 0.79 | 60.0 | 6.02e-01 | 82.0% | 82.0% |
| 5040671 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.75 | 65.0 | 5.37e-01 | 98.0% | 96.7% |
| 3965161 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.69 | 58.0 | 3.66e-01 | 96.0% | 37.7% |
| 3591527 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.69 | 56.0 | 4.79e-01 | 94.0% | 90.6% |
| 5010477 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.68 | 57.0 | 4.54e-01 | 94.0% | 100.0% |
| 5014007 | 3115.2.1.0 ↗ | a+b two layers › GP2-like › GP2 › GP2 | 0.66 | 53.0 | 5.25e-01 | 100.0% | 87.3% |
| 199962 | 3115.5.1.1 ↗ | a+b two layers › GP2-like › phenylacetate-CoA oxygenase subunit PaaB › phenylacetate-CoA oxygenase subunit PaaB › PaaB | 0.65 | 54.0 | 5.10e-01 | 100.0% | 81.0% |
| 4338821 | 221.1.1.69 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › SNX17-27-31_F1_FERM | 0.64 | 50.0 | 4.02e-01 | 100.0% | 41.9% |
| 5055164 | 5103.1.1.0 ↗ | a/b three-layered sandwiches › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380 | 0.64 | 52.0 | 4.19e-01 | 94.0% | 64.8% |
| 3574007 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.63 | 55.0 | 4.48e-01 | 100.0% | 52.6% |
| 3583600 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.63 | 54.0 | 4.71e-01 | 100.0% | 87.5% |
| 5073712 | 5103.1.1.0 ↗ | a/b three-layered sandwiches › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380 | 0.63 | 51.0 | 4.05e-01 | 96.0% | 62.6% |
| 3409626 | 4114.1.1.2 ↗ | a+b two layers › PHP14-like › PHP14-like › PHP14-like › Ocnus | 0.62 | 51.0 | 4.12e-01 | 100.0% | 45.5% |
| 4304127 | 2484.6.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Periplasmic domain of ExbD/TolR › Periplasmic domain of ExbD/TolR › ExbD | 0.62 | 51.0 | 4.13e-01 | 100.0% | 50.0% |
| 3494434 | 3435.1.1.8 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › DEPDC5_CTD | 0.61 | 50.0 | 3.85e-01 | 100.0% | 80.0% |
| 5458 | 4114.1.1.2 ↗ | a+b two layers › PHP14-like › PHP14-like › PHP14-like › Ocnus | 0.61 | 51.0 | 4.06e-01 | 98.0% | 60.9% |
| 3186438 | 4176.1.1.2 ↗ | a/b three-layered sandwiches › a/b domain in CV3147-like proteins › a/b domain in CV3147-like proteins › a/b domain in CV3147-like proteins › S-Me-THD_N | 0.61 | 50.0 | 3.24e-01 | 100.0% | 18.5% |
| 3722234 | 4176.1.1.2 ↗ | a/b three-layered sandwiches › a/b domain in CV3147-like proteins › a/b domain in CV3147-like proteins › a/b domain in CV3147-like proteins › S-Me-THD_N | 0.61 | 52.0 | 3.38e-01 | 100.0% | 20.4% |
| 5000280 | 5103.1.1.0 ↗ | a/b three-layered sandwiches › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380 | 0.60 | 51.0 | 4.16e-01 | 98.0% | 68.0% |
| 3917143 | 304.100.1.0 ↗ | a+b two layers › Alpha-beta plaits › PurS-like › PurS-like | 0.60 | 48.0 | 4.59e-01 | 92.0% | 85.0% |
| 4979407 | 5103.1.1.0 ↗ | a/b three-layered sandwiches › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380 | 0.59 | 48.0 | 3.86e-01 | 94.0% | 60.9% |
| 3744271 | 3662.1.1.3 ↗ | a+b two layers › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › PAC4 | 0.59 | 42.0 | 3.30e-01 | 78.0% | 41.7% |
| 3172253 | 2004.1.1.212 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Microtub_bd | 0.59 | 44.0 | 2.65e-01 | 82.0% | 24.7% |
| 3636048 | 101.1.8.10 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › DUF3435 | 0.58 | 44.0 | 3.10e-01 | 86.0% | 96.0% |
| 3687651 | 4176.1.1.2 ↗ | a/b three-layered sandwiches › a/b domain in CV3147-like proteins › a/b domain in CV3147-like proteins › a/b domain in CV3147-like proteins › S-Me-THD_N | 0.58 | 49.0 | 3.19e-01 | 100.0% | 20.0% |
| 3276775 | 10.32.1.262 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Golvesin_C | 0.57 | 48.0 | 3.61e-01 | 100.0% | 60.7% |
| 4929002 | 304.121.1.1 ↗ | a+b two layers › Alpha-beta plaits › SP0830-like › SP0830-like › DUF1697 | 0.57 | 46.0 | 3.97e-01 | 98.0% | 83.3% |
| 5080205 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.56 | 42.0 | 4.27e-01 | 100.0% | 94.0% |
| 3440477 | 2484.1.1.15 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › GDA1_CD39 | 0.55 | 44.0 | 3.79e-01 | 100.0% | 63.2% |
| 3699329 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.53 | 41.0 | 2.58e-01 | 98.0% | 13.2% |
| 3783482 | 11.1.1.644 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_Pom152 | 0.53 | 42.0 | 3.43e-01 | 100.0% | 74.8% |
| 3978661 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.52 | 37.0 | 3.31e-01 | 100.0% | 47.8% |
| 3607549 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.52 | 41.0 | 2.82e-01 | 98.0% | 98.2% |
| 4942567 | 11.1.1.284 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 | 0.52 | 39.0 | 3.44e-01 | 100.0% | 51.1% |
| 3244906 | 221.1.1.113 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_3 | 0.51 | 41.0 | 3.39e-01 | 100.0% | 62.7% |
| 3312666 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 41.0 | 3.82e-01 | 98.0% | 70.0% |
| 5041352 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.51 | 40.0 | 3.10e-01 | 100.0% | 36.0% |
| 3546356 | 221.1.1.113 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_3 | 0.51 | 40.0 | 3.16e-01 | 100.0% | 44.6% |
D3
medium
residues 339-388
Domain cluster:
representative