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HQ633071.1__AGH31607.1__SWZG_00095__00094

Bact-Vir

HQ633071.1__AGH31607.1__SWZG_00095__00094

Identity

Accession:
HQ633071 ↗
Kingdom:
phage

Quality

73.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Llyrvirus› Synechococcus_phage_S-SKS1

TaxID: 754042

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-51
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1x7dB01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.62 46.0 3.33e-01 82.4% 82.8%
1wf1A01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.54 37.0 3.19e-01 74.5% 83.3%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3910617 593.1.1.1 ↗ alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like › Cpn60_TCP1 0.60 43.0 2.81e-01 78.4% 30.2%
3670264 304.137.1.4 ↗ a+b two layers › Alpha-beta plaits › NOL1/NOP2/sun N-terminal ferredoxin-like domain › NOL1/NOP2/sun N-terminal ferredoxin-like domain › Methyltr_RsmB-F 0.58 42.0 2.53e-01 76.5% 73.7%
3658035 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.56 43.0 3.28e-01 84.3% 68.8%