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HQ634152.1__AGF91587.1__PRUG_00030__00030
Bact-VirHQ634152.1__AGF91587.1__PRUG_00030__00030
Identity
- Accession:
- HQ634152 ↗
- Kingdom:
- phage
Quality
59.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Autographivirales›
Tangaroavirus›
Prochlorococcus_phage_P-SSP6
TaxID: 382275
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 422-505
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3dfgA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 38.0 | 4.78e-01 | 100.0% | 97.9% |
| 6j7xA01 | 1.25.40.120 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Protein prenylyltransferase | 0.55 | 42.0 | 3.02e-01 | 84.5% | 72.4% |
| 2ve7A02 | 6.10.250.1950 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.54 | 32.0 | 2.86e-01 | 88.1% | 39.3% |
| 1tc3C00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.51 | 27.0 | 3.20e-01 | 100.0% | 78.4% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3475712 | 1134.1.1.0 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain | 0.73 | 49.0 | 5.25e-01 | 100.0% | 81.4% |
| 3348187 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.72 | 42.0 | 2.94e-01 | 97.6% | 17.8% |
| 185363 | 3297.1.1.1 ↗ | extended segments › Helical hairpin in Ndc80 › Helical hairpin in Ndc80 › Helical hairpin in Ndc80 › DUF5595 | 0.56 | 32.0 | 3.69e-01 | 85.7% | 79.3% |
| 3372011 | 109.4.1.621 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_3 | 0.55 | 41.0 | 3.09e-01 | 82.1% | 38.7% |
| 4014087 | 321.1.1.0 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase | 0.54 | 45.0 | 3.05e-01 | 92.9% | 91.6% |
| 3454937 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.53 | 40.0 | 2.80e-01 | 82.1% | 48.1% |
| 3919537 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 40.0 | 3.11e-01 | 85.7% | 88.8% |
D2
medium
residues 134-215
D3
medium
residues 216-375