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HQ634153.1__AGH31812.1__SLPG_00018__00018
Bact-VirHQ634153.1__AGH31812.1__SLPG_00018__00018
Identity
- Accession:
- HQ634153 ↗
- Kingdom:
- phage
Quality
92.7
mean pLDDT
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-58
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qgpA00 | 1.10.30.50 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › | 0.84 | 77.0 | 6.65e-01 | 100.0% | 69.9% |
| 1e7lA01 | 3.40.1800.10 | Alpha Beta › 3-Layer(aba) Sandwich › His-Me finger endonuclease fold › His-Me finger endonucleases | 0.76 | 69.0 | 6.08e-01 | 100.0% | 73.8% |
| 1m08A00 | 3.90.540.10 | Alpha Beta › Alpha-Beta Complex › Colicin E7 immunity protein; Chain B, fragment: Endonuclease domain › Colicin/pyocin, DNase domain | 0.75 | 63.0 | 4.66e-01 | 89.3% | 87.0% |
| 3m7kA00 | 3.30.40.220 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.74 | 66.0 | 4.87e-01 | 100.0% | 62.0% |
| 1w4rA02 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.70 | 49.0 | 5.43e-01 | 87.5% | 100.0% |
| 5feyA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.63 | 42.0 | 3.78e-01 | 89.3% | 50.0% |
| 2fd4A00 | 3.30.40.110 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › AvrPtoB, C-terminal domain | 0.58 | 49.0 | 4.11e-01 | 100.0% | 70.5% |
| 2xzmZ00 | 3.30.1230.20 | Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › Ribosomal protein S21 | 0.55 | 43.0 | 3.66e-01 | 89.3% | 54.6% |
| 3j7aZ00 | 3.30.1230.20 | Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › Ribosomal protein S21 | 0.54 | 43.0 | 4.01e-01 | 91.1% | 75.0% |
| 5fb0C01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.51 | 38.0 | 3.75e-01 | 100.0% | 77.0% |
ECOD (59)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4839749 | 3821.1.1.0 ↗ | a+b complex topology › CRISPR-associated endonuclease Cas9 beta-hairpin domain › CRISPR-associated endonuclease Cas9 beta-hairpin domain › CRISPR-associated endonuclease Cas9 beta-hairpin domain | 0.88 | 62.0 | 6.75e-01 | 76.8% | 91.1% |
| 3952818 | 378.1.1.27 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_5 | 0.85 | 71.0 | 6.42e-01 | 100.0% | 68.9% |
| 3277754 | 377.1.1.88 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › HNH | 0.85 | 71.0 | 6.54e-01 | 100.0% | 72.9% |
| 4937899 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.85 | 74.0 | 6.20e-01 | 100.0% | 58.9% |
| 185780 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.84 | 77.0 | 6.33e-01 | 100.0% | 59.8% |
| 3950953 | 377.1.1.78 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › HNH_5 | 0.84 | 70.0 | 6.52e-01 | 100.0% | 72.9% |
| 4959591 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.84 | 77.0 | 7.33e-01 | 100.0% | 90.8% |
| 2991844 | 378.1.1.10 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_4 | 0.84 | 76.0 | 6.02e-01 | 100.0% | 59.6% |
| 1684075 | 378.1.1.10 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_4 | 0.84 | 74.0 | 5.20e-01 | 98.2% | 38.9% |
| 5070853 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.84 | 76.0 | 6.57e-01 | 100.0% | 65.9% |
| 4989310 | 378.1.1.27 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_5 | 0.84 | 63.0 | 4.26e-01 | 89.3% | 23.8% |
| 3965880 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.84 | 75.0 | 6.39e-01 | 100.0% | 82.0% |
| 4941657 | 377.1.1.88 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › HNH | 0.83 | 76.0 | 6.82e-01 | 100.0% | 81.3% |
| 3953218 | 378.1.1.23 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › DUF222 | 0.83 | 72.0 | 5.19e-01 | 100.0% | 34.8% |
| 3590055 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.83 | 75.0 | 5.87e-01 | 100.0% | 51.3% |
| 4932123 | 377.7.1.2 ↗ | few secondary structure elements › Glucocorticoid receptor-like › 82 prophage-derived uncharacterized protein ybcO › 82 prophage-derived uncharacterized protein ybcO › HNH | 0.83 | 73.0 | 6.75e-01 | 100.0% | 77.1% |
| 3952892 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.83 | 73.0 | 5.54e-01 | 100.0% | 43.2% |
| 3952776 | 377.1.1.88 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › HNH | 0.83 | 73.0 | 6.92e-01 | 100.0% | 83.1% |
| 3957069 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.82 | 72.0 | 5.10e-01 | 100.0% | 33.8% |
| 5019258 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.82 | 74.0 | 6.55e-01 | 100.0% | 76.2% |
| 3953524 | 378.1.1.23 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › DUF222 | 0.82 | 71.0 | 5.13e-01 | 100.0% | 34.8% |
| 3963404 | 377.1.1.88 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › HNH | 0.82 | 74.0 | 6.17e-01 | 100.0% | 76.8% |
| 2485694 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.82 | 73.0 | 5.48e-01 | 100.0% | 45.5% |
| 4999440 | 378.1.1.27 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_5 | 0.81 | 71.0 | 6.12e-01 | 100.0% | 63.5% |
| 3587782 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.81 | 73.0 | 5.77e-01 | 100.0% | 52.7% |
| 3278018 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.80 | 69.0 | 6.95e-01 | 100.0% | 94.5% |
| 2859872 | 378.1.1.10 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_4 | 0.80 | 71.0 | 4.84e-01 | 98.2% | 31.2% |
| 4986026 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.80 | 60.0 | 4.12e-01 | 89.3% | 24.3% |
| 3317146 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.80 | 72.0 | 5.49e-01 | 100.0% | 60.5% |
| 3440476 | 378.1.1.10 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_4 | 0.79 | 71.0 | 5.51e-01 | 100.0% | 60.5% |
| 4922670 | 3820.1.1.6 ↗ | a+b complex topology › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain › Cas9_PI, Cas9_RuvC | 0.79 | 56.0 | 3.92e-01 | 75.0% | 25.4% |
| 3307439 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.79 | 70.0 | 5.40e-01 | 100.0% | 60.7% |
| 3955812 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.78 | 65.0 | 5.51e-01 | 100.0% | 55.9% |
| 3952384 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.78 | 68.0 | 5.74e-01 | 100.0% | 57.9% |
| 5016552 | 378.1.1.10 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_4 | 0.78 | 70.0 | 5.58e-01 | 100.0% | 53.6% |
| 4966182 | 378.1.1.9 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 | 0.78 | 69.0 | 5.33e-01 | 100.0% | 47.2% |
| 4951302 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.78 | 69.0 | 6.62e-01 | 100.0% | 86.2% |
| 3952923 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.78 | 67.0 | 5.57e-01 | 100.0% | 55.0% |
| 3981149 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.77 | 69.0 | 6.14e-01 | 100.0% | 73.4% |
| 4998487 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.77 | 69.0 | 5.75e-01 | 100.0% | 60.0% |
| 3948700 | 378.1.1.9 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 | 0.77 | 68.0 | 5.24e-01 | 100.0% | 48.4% |
| 3953059 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.76 | 66.0 | 5.66e-01 | 100.0% | 61.1% |
| 5049537 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.76 | 67.0 | 5.64e-01 | 100.0% | 58.5% |
| 4839754 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.75 | 65.0 | 4.79e-01 | 100.0% | 38.8% |
| 3566304 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.75 | 49.0 | 5.45e-01 | 89.3% | 95.0% |
| 8235 | 378.1.1.3 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_7 | 0.75 | 67.0 | 5.43e-01 | 100.0% | 54.4% |
| 4981807 | 378.1.1.9 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 | 0.75 | 65.0 | 4.74e-01 | 100.0% | 38.7% |
| 2449258 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.73 | 63.0 | 4.57e-01 | 100.0% | 38.4% |
| 3198748 | 378.1.1.9 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 | 0.73 | 64.0 | 4.69e-01 | 100.0% | 56.0% |
| 3964177 | 377.7.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › 82 prophage-derived uncharacterized protein ybcO › 82 prophage-derived uncharacterized protein ybcO › YbcO | 0.65 | 55.0 | 4.83e-01 | 100.0% | 63.3% |
| 2462317 | 4205.1.1.2 ↗ | a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like › GAD-like,T6SS_Tdi1_C | 0.63 | 47.0 | 3.18e-01 | 100.0% | 20.8% |
| 4605018 | 221.1.1.54 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ras_bdg_2 | 0.59 | 49.0 | 4.03e-01 | 100.0% | 68.7% |
| 3783288 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 43.0 | 3.58e-01 | 89.3% | 58.2% |
| 2673846 | 3167.1.1.1 ↗ | a+b two layers › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) › Ribosomal_S21e | 0.54 | 43.0 | 3.84e-01 | 89.3% | 65.1% |
| 2831825 | 3167.1.1.1 ↗ | a+b two layers › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) › Ribosomal_S21e | 0.54 | 43.0 | 4.09e-01 | 89.3% | 77.9% |
| 3599253 | 3167.1.1.0 ↗ | a+b two layers › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) | 0.54 | 42.0 | 3.84e-01 | 89.3% | 66.3% |
| 4833007 | 3167.1.1.1 ↗ | a+b two layers › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) › Ribosomal_S21e | 0.54 | 43.0 | 3.74e-01 | 89.3% | 60.2% |
| 4941556 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 37.0 | 3.06e-01 | 78.6% | 67.3% |
| 3594595 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 36.0 | 2.60e-01 | 80.4% | 48.2% |
D2
medium
residues 64-160
Domain cluster:
representative
CATH (75)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1gaxA05 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.88 | 59.0 | 6.77e-01 | 71.1% | 90.4% |
| 6r1nA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.87 | 64.0 | 6.27e-01 | 75.3% | 86.4% |
| 1wleA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.86 | 64.0 | 6.06e-01 | 77.3% | 92.1% |
| 2qywA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.86 | 67.0 | 6.76e-01 | 93.8% | 82.1% |
| 2q0oC00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.85 | 64.0 | 6.81e-01 | 99.0% | 88.4% |
| 3t98B00 | 6.10.140.1350 | Special › Helix non-globular › Helix Hairpins › | 0.85 | 63.0 | 6.65e-01 | 76.3% | 90.7% |
| 1yg2A02 | 6.10.140.190 | Special › Helix non-globular › Helix Hairpins › | 0.85 | 60.0 | 6.21e-01 | 72.2% | 81.1% |
| 3r84A00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.84 | 64.0 | 7.05e-01 | 79.4% | 100.0% |
| 3onjA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.84 | 63.0 | 6.31e-01 | 87.6% | 77.3% |
| 3fd9A03 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.84 | 58.0 | 6.65e-01 | 71.1% | 100.0% |
| 5jrcA00 | 1.20.58.2140 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.84 | 57.0 | 4.49e-01 | 94.8% | 36.6% |
| 2efkA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.82 | 61.0 | 4.36e-01 | 77.3% | 29.8% |
| 1z0pA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.82 | 54.0 | 6.18e-01 | 70.1% | 89.0% |
| 1i4dA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.82 | 61.0 | 4.78e-01 | 77.3% | 44.7% |
| 1fs0G02 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.82 | 63.0 | 6.63e-01 | 80.4% | 93.3% |
| 4nb5B02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.82 | 52.0 | 6.29e-01 | 70.1% | 98.4% |
| 2etnB01 | 1.10.287.180 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain | 0.81 | 57.0 | 6.40e-01 | 74.2% | 92.1% |
| 2ch7A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.81 | 61.0 | 4.13e-01 | 77.3% | 24.6% |
| 3rq9A00 | 1.10.287.2500 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.81 | 57.0 | 6.31e-01 | 91.8% | 89.7% |
| 4dylA02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.81 | 61.0 | 6.21e-01 | 77.3% | 81.9% |
| 3tulB00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.81 | 60.0 | 5.34e-01 | 77.3% | 78.9% |
| 3lssA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.81 | 60.0 | 5.70e-01 | 77.3% | 87.5% |
| 3nrxA00 | 1.20.58.1520 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.80 | 68.0 | 6.22e-01 | 94.8% | 69.9% |
| 1vcsA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.79 | 58.0 | 5.71e-01 | 89.7% | 71.6% |
| 2js5A00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.79 | 55.0 | 6.35e-01 | 85.6% | 98.6% |
| 1x04A00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.79 | 59.0 | 4.60e-01 | 78.4% | 38.5% |
| 4mhlA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.79 | 54.0 | 4.52e-01 | 92.8% | 42.9% |
| 2gl2B00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.78 | 58.0 | 5.55e-01 | 76.3% | 69.7% |
| 2gtsA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.78 | 56.0 | 6.16e-01 | 74.2% | 97.4% |
| 3rx6A00 | 1.20.58.1090 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phage polarity suppression protein monomer | 0.77 | 67.0 | 5.32e-01 | 92.8% | 83.4% |
| 3g67A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.77 | 57.0 | 4.35e-01 | 77.3% | 35.2% |
| 1lvfB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.77 | 66.0 | 6.47e-01 | 94.8% | 84.6% |
| 6a3kA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.77 | 57.0 | 5.10e-01 | 87.6% | 57.4% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.76 | 58.0 | 5.73e-01 | 80.4% | 75.5% |
| 2bdeA03 | 1.20.58.1160 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.76 | 52.0 | 5.69e-01 | 74.2% | 88.3% |
| 4q20A01 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.76 | 47.0 | 5.02e-01 | 75.3% | 73.2% |
| 2ke4A00 | 6.10.140.470 | Special › Helix non-globular › Helix Hairpins › | 0.75 | 56.0 | 5.64e-01 | 77.3% | 77.6% |
| 3hr0B01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.75 | 55.0 | 6.03e-01 | 76.3% | 94.9% |
| 2qe7G01 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.75 | 54.0 | 5.50e-01 | 75.3% | 83.5% |
| 1wa8A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.75 | 56.0 | 5.57e-01 | 78.4% | 77.8% |
| 2fupA00 | 1.20.58.300 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › FlgN-like | 0.75 | 65.0 | 5.89e-01 | 100.0% | 70.9% |
| 3qo8A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.74 | 55.0 | 5.33e-01 | 77.3% | 86.8% |
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.74 | 56.0 | 5.57e-01 | 97.9% | 75.5% |
| 3eabE00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.74 | 53.0 | 5.59e-01 | 93.8% | 83.7% |
| 1sumB01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.73 | 59.0 | 5.71e-01 | 93.8% | 77.6% |
| 4hz4A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.73 | 52.0 | 4.93e-01 | 96.9% | 63.4% |
| 2i0mA01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.73 | 56.0 | 5.46e-01 | 91.8% | 74.5% |
| 3v5uA01 | 6.10.280.80 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › NCX, peripheral helical region | 0.73 | 53.0 | 5.94e-01 | 78.4% | 97.4% |
| 8ipqB01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.73 | 64.0 | 4.46e-01 | 93.8% | 41.4% |
| 5fhiA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.73 | 54.0 | 4.77e-01 | 92.8% | 54.7% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.72 | 52.0 | 5.68e-01 | 75.3% | 97.4% |
| 4h63H01 | 1.20.58.1710 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 52.0 | 5.89e-01 | 78.4% | 100.0% |
| 4cqiA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 64.0 | 6.17e-01 | 94.8% | 92.5% |
| 2b5uA02 | 1.10.287.620 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins | 0.72 | 53.0 | 4.47e-01 | 77.3% | 79.5% |
| 2cmrA00 | 1.20.58.1860 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 66.0 | 5.20e-01 | 99.0% | 83.3% |
| 1qsdA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 63.0 | 6.24e-01 | 94.8% | 96.1% |
| 1u7lA02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.71 | 55.0 | 4.44e-01 | 81.4% | 53.0% |
| 2b5dX01 | 3.20.110.10 | Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain | 0.71 | 49.0 | 3.15e-01 | 70.1% | 26.2% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 50.0 | 5.10e-01 | 74.2% | 76.1% |
| 7sgrA02 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.71 | 64.0 | 4.41e-01 | 96.9% | 40.6% |
| 2xl4A00 | 1.20.120.1420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › LntA helical domain | 0.70 | 64.0 | 5.52e-01 | 100.0% | 94.6% |
| 1bf5A01 | 1.20.1050.20 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain | 0.69 | 60.0 | 4.98e-01 | 93.8% | 92.9% |
| 1wp1B01 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.69 | 64.0 | 4.20e-01 | 100.0% | 47.2% |
| 7wivA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 63.0 | 4.35e-01 | 100.0% | 41.7% |
| 1gqeA01 | 1.20.58.410 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Release factor | 0.67 | 45.0 | 4.32e-01 | 70.1% | 59.3% |
| 3m9vA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.67 | 55.0 | 4.64e-01 | 91.8% | 54.1% |
| 1s35A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 56.0 | 5.56e-01 | 94.8% | 87.1% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.66 | 55.0 | 5.32e-01 | 89.7% | 79.1% |
| 3rkgA02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.66 | 57.0 | 4.83e-01 | 95.9% | 70.1% |
| 2xokP00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.63 | 43.0 | 4.81e-01 | 72.2% | 93.2% |
| 1cgnA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.63 | 58.0 | 5.30e-01 | 100.0% | 97.6% |
| 2wgmA01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.59 | 41.0 | 4.41e-01 | 73.2% | 86.6% |
| 6ynwH01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.59 | 41.0 | 4.64e-01 | 73.2% | 98.6% |
| 1dd5A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.58 | 47.0 | 4.58e-01 | 95.9% | 78.9% |
| 2e62A01 | 6.10.140.420 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 30.0 | 4.19e-01 | 100.0% | 100.0% |
ECOD (88)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 149872 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.88 | 63.0 | 6.98e-01 | 76.3% | 89.9% |
| 3889245 | 11.2.1.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › Anillin | 0.88 | 64.0 | 4.55e-01 | 74.2% | 29.4% |
| 4038778 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.87 | 65.0 | 6.12e-01 | 77.3% | 86.1% |
| 4401282 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.87 | 65.0 | 6.09e-01 | 77.3% | 87.8% |
| 3770253 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.87 | 65.0 | 5.09e-01 | 77.3% | 82.7% |
| 4028552 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.87 | 64.0 | 4.62e-01 | 76.3% | 53.9% |
| 4465072 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.87 | 65.0 | 6.06e-01 | 77.3% | 88.7% |
| 4156473 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.87 | 63.0 | 6.42e-01 | 75.3% | 88.4% |
| 4475138 | 606.1.1.16 ↗ | alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Transposase_20 | 0.86 | 77.0 | 5.93e-01 | 100.0% | 46.0% |
| 4471073 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.86 | 65.0 | 4.20e-01 | 77.3% | 61.9% |
| 3605285 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.85 | 64.0 | 5.45e-01 | 92.8% | 51.7% |
| 4051951 | 605.2.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 | 0.85 | 64.0 | 6.62e-01 | 77.3% | 85.6% |
| 4652719 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.85 | 63.0 | 6.44e-01 | 77.3% | 81.1% |
| 4220356 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.85 | 62.0 | 4.15e-01 | 76.3% | 51.6% |
| 3892002 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.84 | 69.0 | 5.77e-01 | 94.8% | 53.5% |
| 3257358 | 4177.1.1.8 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_3 | 0.84 | 62.0 | 4.64e-01 | 77.3% | 34.2% |
| 3764851 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.84 | 62.0 | 6.42e-01 | 76.3% | 82.2% |
| 3937465 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.83 | 65.0 | 4.83e-01 | 80.4% | 38.6% |
| 2572867 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.83 | 66.0 | 6.23e-01 | 81.4% | 83.8% |
| 3913300 | 3755.3.1.303 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF21A_4th | 0.83 | 62.0 | 5.26e-01 | 77.3% | 86.0% |
| 3848917 | 3939.1.1.0 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain | 0.83 | 61.0 | 6.52e-01 | 76.3% | 87.1% |
| 3402340 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.83 | 62.0 | 4.36e-01 | 77.3% | 28.5% |
| 3391706 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.83 | 63.0 | 5.60e-01 | 89.7% | 58.5% |
| 3898566 | 192.5.1.14 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA | 0.83 | 69.0 | 5.95e-01 | 91.8% | 60.0% |
| 4505260 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.83 | 59.0 | 4.62e-01 | 73.2% | 50.3% |
| 3794795 | 603.1.1.3 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE | 0.82 | 66.0 | 6.56e-01 | 93.8% | 81.0% |
| 3385950 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.82 | 57.0 | 6.66e-01 | 72.2% | 100.0% |
| 4479045 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.82 | 63.0 | 4.67e-01 | 79.4% | 98.6% |
| 4860885 | 633.6.1.6 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACAD9-ACADV_C | 0.81 | 54.0 | 5.27e-01 | 73.2% | 62.9% |
| 4178099 | 632.22.1.176 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › PF27734 | 0.81 | 60.0 | 5.04e-01 | 77.3% | 49.0% |
| 3350539 | 192.23.1.6 ↗ | alpha bundles › Long alpha-hairpin › DUF683 › DUF683 › Med10 | 0.81 | 59.0 | 6.31e-01 | 89.7% | 87.1% |
| 4072081 | 603.1.1.5 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-6_N | 0.80 | 67.0 | 5.04e-01 | 87.6% | 40.5% |
| 3770066 | 3291.1.1.169 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › KIF21A_4th | 0.80 | 60.0 | 4.65e-01 | 77.3% | 42.6% |
| 3577937 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.80 | 64.0 | 6.00e-01 | 91.8% | 70.4% |
| 4612826 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.80 | 48.0 | 5.30e-01 | 80.4% | 73.8% |
| 3225274 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.79 | 67.0 | 5.15e-01 | 95.9% | 43.0% |
| 3608554 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.79 | 56.0 | 4.78e-01 | 72.2% | 63.4% |
| 3408094 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.79 | 71.0 | 6.22e-01 | 94.8% | 77.0% |
| 5055566 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.78 | 67.0 | 6.30e-01 | 100.0% | 76.5% |
| 4427438 | 5085.1.1.2 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › PF27489, PF29296 | 0.78 | 70.0 | 4.71e-01 | 100.0% | 28.2% |
| 3725506 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.78 | 60.0 | 5.72e-01 | 80.4% | 89.1% |
| 4030265 | 633.22.1.0 ↗ | alpha bundles › Bromodomain-like › Vitamin K epoxide reductase (VKOR) › Vitamin K epoxide reductase (VKOR) | 0.78 | 68.0 | 5.29e-01 | 92.8% | 64.9% |
| 3462175 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.77 | 62.0 | 5.53e-01 | 89.7% | 62.3% |
| 5066847 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.77 | 55.0 | 5.68e-01 | 87.6% | 78.9% |
| 3935633 | 1203.1.2.1 ↗ | alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 › ASD2 | 0.77 | 69.0 | 5.51e-01 | 96.9% | 55.1% |
| 3786136 | 603.1.1.3 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE | 0.77 | 56.0 | 5.29e-01 | 76.3% | 66.1% |
| 3788311 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.76 | 68.0 | 6.37e-01 | 94.8% | 81.7% |
| 3606080 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.76 | 62.0 | 5.94e-01 | 93.8% | 75.5% |
| 3579590 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.76 | 66.0 | 5.80e-01 | 92.8% | 91.4% |
| 3839166 | 603.5.1.0 ↗ | alpha bundles › STAT-like › FlgN-like › FlgN-like | 0.76 | 64.0 | 5.92e-01 | 95.9% | 71.7% |
| 4325844 | 5085.1.1.2 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › PF27489, PF29296 | 0.76 | 70.0 | 4.46e-01 | 100.0% | 62.0% |
| 5056100 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.76 | 56.0 | 6.24e-01 | 80.4% | 100.0% |
| 4992256 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.76 | 54.0 | 5.37e-01 | 80.4% | 71.7% |
| 3317382 | 605.4.1.5 ↗ | alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein › SCAB-ABD, SCAB_CC | 0.76 | 56.0 | 4.44e-01 | 77.3% | 44.2% |
| 3511532 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.75 | 70.0 | 5.09e-01 | 100.0% | 52.0% |
| 3258119 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.75 | 56.0 | 4.19e-01 | 77.3% | 35.1% |
| 3711300 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.75 | 70.0 | 5.88e-01 | 100.0% | 86.5% |
| 3830963 | 603.1.1.100 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27017 | 0.75 | 65.0 | 6.04e-01 | 93.8% | 74.2% |
| 4028874 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.75 | 55.0 | 3.85e-01 | 77.3% | 29.8% |
| 3498924 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.75 | 70.0 | 6.12e-01 | 100.0% | 76.4% |
| 3598025 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.75 | 58.0 | 4.75e-01 | 81.4% | 78.2% |
| 3693258 | 604.7.1.1 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA | 0.75 | 66.0 | 6.32e-01 | 93.8% | 95.5% |
| 3701245 | 604.7.1.1 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA | 0.75 | 67.0 | 6.38e-01 | 94.8% | 90.0% |
| 3782256 | 2004.1.1.429 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 | 0.74 | 70.0 | 4.55e-01 | 99.0% | 31.8% |
| 3432902 | 603.1.1.5 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-6_N | 0.74 | 62.0 | 5.89e-01 | 89.7% | 79.1% |
| 3838659 | 5085.1.1.0 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.74 | 68.0 | 4.43e-01 | 100.0% | 50.5% |
| 3715005 | 604.8.1.0 ↗ | alpha bundles › Spectrin repeat-like › Smac/diablo › Smac/diablo | 0.74 | 65.0 | 5.41e-01 | 94.8% | 88.7% |
| 4313126 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.73 | 51.0 | 3.66e-01 | 73.2% | 25.5% |
| 3598836 | 604.7.1.0 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A | 0.73 | 65.0 | 6.24e-01 | 94.8% | 90.0% |
| 3512620 | 3755.4.1.1 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › PI3K_P85_iSH2 | 0.73 | 69.0 | 5.69e-01 | 100.0% | 91.3% |
| 3516452 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.73 | 63.0 | 4.62e-01 | 100.0% | 38.3% |
| 3531746 | 603.1.1.105 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF31021 | 0.73 | 63.0 | 6.19e-01 | 93.8% | 85.7% |
| 3999930 | 603.1.1.105 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF31021 | 0.72 | 63.0 | 6.05e-01 | 92.8% | 81.8% |
| 3589400 | 192.5.1.4 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › DUF1140 | 0.72 | 65.0 | 6.44e-01 | 94.8% | 96.0% |
| 3908132 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.72 | 53.0 | 3.89e-01 | 77.3% | 29.9% |
| 4028818 | 603.1.1.17 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SNARE | 0.72 | 59.0 | 4.58e-01 | 88.7% | 87.6% |
| 3279013 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.70 | 64.0 | 4.41e-01 | 100.0% | 40.6% |
| 3498152 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.70 | 57.0 | 4.51e-01 | 99.0% | 44.2% |
| 3237394 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.68 | 62.0 | 5.28e-01 | 100.0% | 94.2% |
| 3270603 | 5001.1.1.81 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › THH1_TOM1-3_dom | 0.68 | 59.0 | 4.28e-01 | 94.8% | 80.4% |
| 4106620 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.67 | 48.0 | 5.28e-01 | 75.3% | 96.0% |
| 3268975 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.66 | 60.0 | 5.17e-01 | 100.0% | 66.0% |
| 5054862 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.66 | 60.0 | 5.03e-01 | 99.0% | 98.1% |
| 3236195 | 603.2.1.0 ↗ | alpha bundles › STAT-like › STAT › STAT | 0.64 | 54.0 | 4.46e-01 | 92.8% | 61.7% |
| 3491111 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.64 | 52.0 | 5.18e-01 | 90.7% | 86.0% |
| 4243427 | 3560.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 8 › Mediator of RNA polymerase II transcription subunit 8 › Mediator of RNA polymerase II transcription subunit 8 › Med8 | 0.62 | 51.0 | 4.32e-01 | 88.7% | 56.2% |
| 5013116 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.62 | 54.0 | 3.43e-01 | 100.0% | 23.0% |
| 3420329 | 109.4.1.1184 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF747 | 0.61 | 54.0 | 3.91e-01 | 99.0% | 56.1% |
D3
medium
residues 192-292
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fjeB01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.67 | 24.0 | 2.73e-01 | 95.0% | 39.5% |
| 2oarB00 | 1.10.1200.120 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Large-conductance mechanosensitive channel, MscL; domain 1 | 0.61 | 42.0 | 3.95e-01 | 71.3% | 63.2% |
| 2y9wA00 | 1.10.1280.10 | Mainly Alpha › Orthogonal Bundle › di-copper center containing domain from catechol oxidase › Di-copper center containing domain from catechol oxidase | 0.52 | 40.0 | 2.71e-01 | 83.2% | 27.4% |
| 1r8gA00 | 3.30.590.20 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › | 0.52 | 39.0 | 2.61e-01 | 78.2% | 71.9% |
| 2zy2A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 37.0 | 3.20e-01 | 74.3% | 69.9% |
| 2w00A02 | 3.90.640.50 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › | 0.51 | 28.0 | 3.11e-01 | 79.2% | 68.5% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3290009 | 4107.1.1.1 ↗ | alpha arrays › Jann2411-like › Jann2411-like › Jann2411-like › ABATE,zf-CGNR | 0.62 | 40.0 | 3.31e-01 | 95.0% | 37.6% |
| 2639388 | 101.1.2.455 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_CDT1 | 0.58 | 42.0 | 3.79e-01 | 76.2% | 86.9% |
| 5049161 | 177.1.1.0 ↗ | alpha bundles › Phospholipase C/P1 nuclease › Phospholipase C/P1 nuclease › Phospholipase C/P1 nuclease | 0.57 | 45.0 | 3.47e-01 | 83.2% | 96.2% |
| 5069317 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.56 | 39.0 | 2.57e-01 | 73.3% | 78.8% |
| 3969345 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.55 | 39.0 | 3.00e-01 | 72.3% | 64.5% |
| 5029795 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.55 | 40.0 | 2.67e-01 | 75.2% | 76.5% |
| 3985268 | 5085.1.1.1 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP | 0.54 | 38.0 | 2.77e-01 | 72.3% | 61.6% |
| 5056814 | 3352.1.1.0 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain | 0.53 | 40.0 | 2.88e-01 | 80.2% | 94.4% |
| 3930773 | 633.23.1.17 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › DuoxA | 0.53 | 40.0 | 2.96e-01 | 81.2% | 94.8% |
| 4003270 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.53 | 41.0 | 2.80e-01 | 94.1% | 24.8% |
| 185741 | 3381.1.1.1 ↗ | alpha arrays › C-terminal domain of the type III effector Xcv3220 (XopL) › C-terminal domain of the type III effector Xcv3220 (XopL) › C-terminal domain of the type III effector Xcv3220 (XopL) › XopL_C | 0.52 | 39.0 | 3.34e-01 | 81.2% | 89.1% |
| 3789630 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.52 | 38.0 | 2.91e-01 | 77.2% | 90.9% |
| 3271984 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.51 | 37.0 | 3.29e-01 | 75.2% | 79.3% |
| 3333203 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.51 | 40.0 | 3.85e-01 | 85.1% | 73.9% |
| 3988925 | 3227.1.1.1 ↗ | alpha complex topology › phosphorylation-coupled saccharide transporter ChbC › phosphorylation-coupled saccharide transporter ChbC › phosphorylation-coupled saccharide transporter ChbC › PTS_EIIC | 0.50 | 40.0 | 2.71e-01 | 88.1% | 28.9% |
| 3260912 | 593.1.1.1 ↗ | alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like › Cpn60_TCP1 | 0.50 | 41.0 | 3.09e-01 | 90.1% | 84.1% |