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HQ634156.1__AGH31909.1__VPIG_00051__00051
Bact-VirHQ634156.1__AGH31909.1__VPIG_00051__00051
Identity
- Accession:
- HQ634156 ↗
- Kingdom:
- phage
Quality
67.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-75
Domain cluster:
rep: KJ019146.1__AIX42271.1__Syn7803C16_52__00052__D2-97
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10544.16 best | T5orf172 | 22.6 | 1.70e-04 | 97.2% | 81.6% |
| PF13455.13 | MUG113 | 37.6 | 3.80e-09 | 83.1% | 82.2% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ln0A00 | 3.40.1440.10 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.71 | 61.0 | 5.59e-01 | 94.4% | 95.7% |
| 4gi3C00 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.68 | 43.0 | 4.76e-01 | 94.4% | 80.7% |
| 3fsyA02 | 3.30.60.70 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Trimeric LpxA-like enzymes | 0.62 | 35.0 | 4.19e-01 | 100.0% | 95.0% |
| 2h5eA03 | 3.30.70.3280 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptide chain release factor 3, domain III | 0.62 | 45.0 | 3.70e-01 | 78.9% | 74.5% |
| 2qv6B02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.59 | 42.0 | 3.58e-01 | 76.1% | 77.0% |
| 4qbuA01 | 3.30.70.3290 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 42.0 | 3.53e-01 | 80.3% | 93.0% |
| 3ibtA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 43.0 | 3.31e-01 | 88.7% | 54.4% |
| 5daeA00 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.56 | 36.0 | 3.96e-01 | 98.6% | 82.5% |
| 2n17A00 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.55 | 34.0 | 3.65e-01 | 100.0% | 76.8% |
| 3nyiB01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 41.0 | 3.29e-01 | 85.9% | 42.7% |
| 4zdnA02 | 1.10.1240.100 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.53 | 37.0 | 3.43e-01 | 74.6% | 74.5% |
| 2jveA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.52 | 34.0 | 3.49e-01 | 100.0% | 69.0% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3735748 | 821.1.1.3 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 | 0.86 | 81.0 | 5.91e-01 | 100.0% | 54.1% |
| 3698242 | 821.1.1.10 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › MUG113 | 0.83 | 78.0 | 6.31e-01 | 100.0% | 69.1% |
| 153859 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.68 | 43.0 | 4.76e-01 | 94.4% | 80.7% |
| 3400351 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.67 | 50.0 | 5.41e-01 | 100.0% | 93.3% |
| 3874464 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.64 | 48.0 | 3.06e-01 | 80.3% | 28.2% |
| 4955459 | 7523.1.1.32 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › NMT1_3 | 0.56 | 41.0 | 3.42e-01 | 85.9% | 42.2% |
| 3961146 | 304.11.1.1 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Acyl_transf_1 | 0.54 | 41.0 | 3.46e-01 | 84.5% | 79.1% |
| 169110 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.53 | 35.0 | 3.57e-01 | 100.0% | 68.6% |
| 5065444 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.53 | 40.0 | 3.61e-01 | 83.1% | 89.5% |
| 3265906 | 3012.1.1.4 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Hydrolase_3 | 0.50 | 42.0 | 3.70e-01 | 98.6% | 85.2% |
D2
high
residues 83-154