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HQ634157.1__AGH32113.1__VPHG_00046__00046

Bact-Vir

HQ634157.1__AGH32113.1__VPHG_00046__00046

Identity

Accession:
HQ634157 ↗
Kingdom:
phage

Quality

77.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-77
PDB
Domain cluster: representative
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 47.0 5.31e-01 96.1% 89.7%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 50.0 4.49e-01 72.7% 55.2%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 44.0 5.08e-01 96.1% 89.3%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 49.0 5.54e-01 98.7% 100.0%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 49.0 5.12e-01 100.0% 81.9%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 51.0 5.10e-01 98.7% 77.5%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 46.0 5.19e-01 98.7% 98.2%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 50.0 5.10e-01 98.7% 82.7%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 48.0 4.85e-01 100.0% 77.6%
5y9sC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 51.0 5.03e-01 98.7% 78.0%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 53.0 5.09e-01 100.0% 76.4%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 49.0 4.76e-01 98.7% 72.4%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 46.0 4.79e-01 98.7% 82.9%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 50.0 4.86e-01 98.7% 77.3%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 49.0 4.81e-01 98.7% 76.5%
4wvaB00 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.63 48.0 3.04e-01 83.1% 54.6%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 45.0 4.84e-01 98.7% 92.1%
3py8A04 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.62 56.0 4.53e-01 100.0% 81.9%
3hhgE01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 49.0 4.70e-01 98.7% 76.1%
6g94A00 1.20.950.20 Mainly Alpha › Up-down Bundle › Fumarate Reductase Cytochrome B subunit › Transmembrane di-heme cytochromes, Chain C 0.60 53.0 4.13e-01 98.7% 87.8%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 48.0 4.56e-01 97.4% 73.3%
3mklA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.60 43.0 3.97e-01 77.9% 76.9%
1lvaA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 42.0 4.64e-01 97.4% 93.5%
1fc3B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 52.0 4.81e-01 100.0% 82.2%
3nivC02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.59 43.0 3.72e-01 77.9% 62.1%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 46.0 4.88e-01 100.0% 98.5%
4pxoA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.57 42.0 3.62e-01 80.5% 79.4%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 43.0 4.68e-01 96.1% 100.0%
1b9mB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 47.0 4.34e-01 100.0% 72.7%
3nrvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 45.0 3.81e-01 100.0% 53.5%
3ni7A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.55 41.0 3.27e-01 81.8% 59.2%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.55 45.0 4.18e-01 88.3% 100.0%
3g7dA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.54 39.0 3.82e-01 77.9% 100.0%
2dnxA00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 42.0 3.57e-01 85.7% 73.1%
1yj8A02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.53 43.0 3.55e-01 94.8% 93.7%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 44.0 3.77e-01 100.0% 55.8%
1h2tC03 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.52 42.0 3.02e-01 89.6% 43.4%
1zpyA00 6.10.140.1960 Special › Helix non-globular › Helix Hairpins › 0.51 42.0 4.05e-01 92.2% 98.9%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3943462 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 51.0 5.83e-01 81.8% 100.0%
3971665 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 51.0 5.16e-01 79.2% 73.3%
3688231 5069.1.1.0 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes 0.70 53.0 4.14e-01 80.5% 66.7%
3962431 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.70 50.0 5.12e-01 98.7% 77.3%
3958970 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.70 49.0 4.93e-01 100.0% 71.2%
4017554 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.70 55.0 4.50e-01 83.1% 78.5%
3968604 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.70 51.0 4.84e-01 100.0% 66.3%
3959738 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 49.0 4.58e-01 100.0% 60.0%
3283074 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.69 50.0 4.87e-01 100.0% 69.4%
4395758 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.68 50.0 5.01e-01 98.7% 75.0%
3974013 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.68 49.0 5.41e-01 100.0% 96.7%
3278306 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.68 56.0 4.28e-01 88.3% 73.5%
3954318 101.1.1.300 alpha arrays › HTH › HTH › Three-helical HTH › HTH_30 0.68 49.0 4.70e-01 98.7% 65.6%
3287759 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.68 49.0 5.32e-01 98.7% 90.8%
3972360 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.67 47.0 5.27e-01 98.7% 95.0%
3972270 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.67 50.0 5.25e-01 100.0% 87.1%
3971990 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.67 50.0 4.86e-01 100.0% 71.8%
4588620 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.67 49.0 4.68e-01 100.0% 66.7%
3942695 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.67 51.0 5.43e-01 98.7% 96.9%
3288310 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.66 50.0 5.28e-01 98.7% 88.6%
2332937 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.66 48.0 4.91e-01 98.7% 79.7%
3971154 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.66 50.0 5.19e-01 97.4% 90.0%
3941764 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.66 48.0 5.17e-01 98.7% 92.3%
4875610 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.66 50.0 4.83e-01 97.4% 73.3%
5041148 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.65 43.0 4.53e-01 74.0% 74.3%
4398621 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.65 49.0 4.68e-01 100.0% 70.0%
3286659 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.65 51.0 5.33e-01 100.0% 92.9%
3975610 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.65 49.0 5.12e-01 98.7% 88.6%
3941460 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.64 48.0 5.12e-01 97.4% 92.3%
2761 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.64 49.0 4.76e-01 98.7% 72.4%
3980681 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.64 51.0 5.05e-01 100.0% 81.2%
5039663 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.64 43.0 4.41e-01 75.3% 70.7%
3290024 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.64 49.0 4.87e-01 100.0% 78.8%
3970403 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.64 50.0 4.81e-01 97.4% 73.3%
4933929 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 49.0 4.98e-01 100.0% 85.3%
4215338 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.63 50.0 4.78e-01 100.0% 73.3%
3978224 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.63 50.0 4.78e-01 100.0% 73.3%
3721781 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.63 50.0 3.93e-01 87.0% 72.7%
3978496 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.63 49.0 5.10e-01 100.0% 91.4%
2441957 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.63 49.0 4.73e-01 98.7% 74.4%
3968864 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.63 47.0 4.83e-01 100.0% 82.7%
3943494 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.63 49.0 4.82e-01 97.4% 77.6%
4980214 4156.1.1.0 alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like 0.62 49.0 4.19e-01 87.0% 56.9%
3290297 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.62 50.0 4.98e-01 97.4% 83.7%
5004061 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.62 46.0 5.03e-01 100.0% 95.3%
4321867 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.62 49.0 5.09e-01 98.7% 92.9%
3972217 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.62 50.0 4.75e-01 97.4% 74.4%
3946548 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.62 49.0 4.70e-01 100.0% 73.3%
4347676 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.61 47.0 4.47e-01 100.0% 68.9%
4297810 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.61 47.0 4.57e-01 100.0% 73.3%
3984815 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.61 40.0 4.51e-01 92.2% 92.7%
3733853 5069.1.1.4 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Ferric_reduct 0.61 53.0 4.01e-01 100.0% 74.0%
4016004 5069.1.1.0 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes 0.59 51.0 3.96e-01 98.7% 71.7%
5013051 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.59 53.0 4.42e-01 98.7% 90.0%
4982076 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.58 53.0 4.31e-01 100.0% 85.0%
5010255 7064.1.1.0 alpha bundles › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 0.57 47.0 3.90e-01 89.6% 80.0%
4978135 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.57 51.0 4.10e-01 98.7% 82.8%
4314061 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.57 51.0 4.84e-01 100.0% 87.1%
4260337 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.56 51.0 4.76e-01 100.0% 85.3%
4653037 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.55 45.0 3.95e-01 100.0% 58.3%
3191582 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.54 47.0 4.00e-01 100.0% 92.3%
3193691 5069.1.1.0 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes 0.53 46.0 3.75e-01 97.4% 69.0%
4458965 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.53 43.0 4.34e-01 92.2% 88.7%
3936693 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.53 40.0 3.68e-01 81.8% 80.0%
3807056 101.1.2.361 alpha arrays › HTH › HTH › winged helix domain › Myb_DNA-binding 0.52 46.0 4.04e-01 100.0% 91.7%
5077218 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.51 45.0 3.30e-01 97.4% 70.2%
5014584 101.1.2.932 alpha arrays › HTH › HTH › winged helix domain › wHTH-PRTase_assc 0.51 45.0 4.44e-01 100.0% 100.0%