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HQ634157.1__AGH32116.1__VPHG_00049__00049

Bact-Vir

HQ634157.1__AGH32116.1__VPHG_00049__00049

Identity

Accession:
HQ634157 ↗
Kingdom:
phage

Quality

87.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-174
PDB
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1t6aA02 3.30.310.120 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein 0.56 22.0 3.07e-01 92.0% 73.1%
4qrlA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.55 35.0 4.11e-01 85.3% 93.6%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2123017 295.1.1.10 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PnpCD_PnpD_N 0.58 45.0 4.55e-01 99.4% 82.6%
5076347 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.57 26.0 3.43e-01 73.6% 77.6%
3649351 4337.1.1.0 a+b two layers › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain 0.57 20.0 2.78e-01 96.9% 58.8%
3270364 3209.1.1.1 a+b two layers › RPL28 › RPL28 › RPL28 › Ribosomal_L28e 0.57 29.0 3.23e-01 90.2% 61.6%
3309149 1.1.11.0 beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain 0.51 20.0 2.99e-01 75.5% 84.6%
3604284 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 24.0 3.10e-01 85.9% 74.7%
4991181 327.11.1.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) 0.50 20.0 3.04e-01 90.8% 89.2%