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HQ634157.1__AGH32237.1__VPHG_00174__00170
Bact-VirHQ634157.1__AGH32237.1__VPHG_00174__00170
Identity
- Accession:
- HQ634157 ↗
- Kingdom:
- phage
Quality
93.9
mean pLDDT
Cluster
View cluster (7 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-37_129-183
Domain cluster:
rep: KT898134.1__ALN97593.1__ARM81mr_p12__00012__D4-32_93-137
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3o27B00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.64 | 24.0 | 2.99e-01 | 77.8% | 50.9% |
| 1ywlA00 | 3.40.1440.10 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.55 | 36.0 | 3.55e-01 | 83.3% | 62.5% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.53 | 35.0 | 3.89e-01 | 71.1% | 90.9% |
| 3vk6A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 32.0 | 3.78e-01 | 84.4% | 93.2% |
| 4r7eA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 30.0 | 3.33e-01 | 81.1% | 72.5% |
| 5trbA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.51 | 30.0 | 3.29e-01 | 82.2% | 73.9% |
| 4pwuC00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.51 | 36.0 | 3.85e-01 | 73.3% | 100.0% |
| 2xb4A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 37.0 | 2.85e-01 | 100.0% | 31.4% |
D2
high
residues 44-121
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ceiA05 | 1.10.486.10 | Mainly Alpha › Orthogonal Bundle › PCRA; domain 4 › PCRA; domain 4 | 0.54 | 42.0 | 3.40e-01 | 87.2% | 76.5% |
| 4jrfA03 | 1.10.20.150 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › | 0.54 | 45.0 | 4.14e-01 | 96.2% | 93.4% |
| 3ttcA01 | 3.90.870.30 | Alpha Beta › Alpha-Beta Complex › DHBP synthase › | 0.52 | 44.0 | 3.39e-01 | 100.0% | 73.2% |
| 4hjzA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.52 | 42.0 | 3.36e-01 | 96.2% | 93.4% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3874335 | 110.1.1.7 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › CARD_2 | 0.59 | 42.0 | 3.92e-01 | 76.9% | 87.6% |
| 3510252 | 170.2.1.0 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein N-terminal domain › Retrovirus capsid protein N-terminal domain | 0.56 | 40.0 | 4.23e-01 | 82.1% | 84.3% |
| 3739476 | 301.8.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase › ACPS | 0.54 | 44.0 | 3.81e-01 | 91.0% | 88.0% |
| 224091 | 3641.1.1.0 ↗ | 0.54 | 44.0 | 4.14e-01 | 96.2% | 95.1% | |
| 4980670 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.53 | 40.0 | 3.61e-01 | 83.3% | 92.7% |
| 4316705 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.51 | 38.0 | 3.86e-01 | 82.1% | 88.7% |
| 4990185 | 101.1.4.18 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 | 0.51 | 38.0 | 3.85e-01 | 91.0% | 81.3% |
| 5055862 | 314.1.1.3 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2d | 0.51 | 38.0 | 2.55e-01 | 82.1% | 41.8% |