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HQ641380.1__ADU79164.1__EcP1_gp13__00013
Bact-VirHQ641380.1__ADU79164.1__EcP1_gp13__00013
Identity
- Accession:
- HQ641380 ↗
- Kingdom:
- phage
Quality
89.1
mean pLDDT
Taxonomy
TaxID: 942016
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-88
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6imjA01 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.61 | 49.0 | 3.59e-01 | 85.9% | 80.3% |
| 2bv4A00 | 2.60.120.400 | Mainly Beta › Sandwich › Jelly Rolls › Calcium-mediated lectin | 0.56 | 31.0 | 2.67e-01 | 71.8% | 33.6% |
| 7wrgB01 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.56 | 46.0 | 2.96e-01 | 88.7% | 22.6% |
| 3mzkB01 | 6.20.50.30 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.55 | 27.0 | 3.37e-01 | 77.5% | 84.2% |
| 3mcbB00 | 2.20.70.30 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › Nascent polypeptide-associated complex domain | 0.54 | 35.0 | 3.78e-01 | 83.1% | 82.8% |
| 8ciwA02 | 2.40.110.10 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 | 0.53 | 40.0 | 3.37e-01 | 84.5% | 66.9% |
| 5yjwA00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.53 | 46.0 | 2.84e-01 | 98.6% | 74.4% |
| 4pc3C03 | 3.30.479.20 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Elongation factor Ts, dimerisation domain | 0.52 | 36.0 | 3.59e-01 | 71.8% | 100.0% |
| 3kenA00 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.52 | 42.0 | 2.71e-01 | 88.7% | 22.5% |
| 2qrdB01 | 2.20.25.290 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.51 | 28.0 | 3.39e-01 | 74.6% | 97.3% |
| 4a4kA02 | 2.30.30.1160 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 39.0 | 3.29e-01 | 88.7% | 87.2% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2628565 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.63 | 33.0 | 4.00e-01 | 71.8% | 85.0% |
| 3396803 | 109.21.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleopor_Nup85 | 0.55 | 43.0 | 2.50e-01 | 85.9% | 27.0% |
| 3579652 | 2484.1.1.7 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ribosomal_S11 | 0.54 | 45.0 | 3.60e-01 | 94.4% | 69.5% |
| 3903507 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 41.0 | 2.60e-01 | 81.7% | 24.7% |
| 3498889 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 40.0 | 3.14e-01 | 81.7% | 86.7% |
| 3585371 | 245.1.1.0 ↗ | a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 | 0.53 | 36.0 | 3.04e-01 | 70.4% | 47.8% |
| 4954975 | 2484.1.1.32 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_C | 0.53 | 38.0 | 2.71e-01 | 77.5% | 94.6% |
| 3658748 | 4099.1.1.14 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Knl1_RWD_C | 0.52 | 47.0 | 4.19e-01 | 100.0% | 73.0% |
| 3514681 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.51 | 32.0 | 3.45e-01 | 91.5% | 73.3% |
| 3476768 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 40.0 | 3.05e-01 | 97.2% | 35.9% |
| 3618518 | 109.21.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleopor_Nup85 | 0.51 | 44.0 | 2.62e-01 | 98.6% | 58.2% |
| 3487385 | 109.21.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleopor_Nup85 | 0.50 | 39.0 | 2.45e-01 | 87.3% | 47.0% |
| 4014561 | 2484.5.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase | 0.50 | 37.0 | 3.26e-01 | 81.7% | 60.0% |