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HQ683709.1__ADZ31642.1__PaVLD_ORF135L__00135

Bact-Vir

HQ683709.1__ADZ31642.1__PaVLD_ORF135L__00135

Identity

Accession:
HQ683709 ↗
Kingdom:
phage

Quality

85.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Planktothrix_phage_PaV-LD

TaxID: 994601

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-83
PDB
Domain cluster: rep: LC545445.1__BCD83184.1__NrS4_02__00002__D4-72
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2kvvA00 1.10.1660.60 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › Putative excisionased domain DUF1233 0.78 57.0 5.69e-01 76.3% 79.5%
3gpvA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.64 55.0 4.91e-01 98.7% 66.4%
6jgwA01 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.62 51.0 4.47e-01 96.1% 58.7%
2lvaA01 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.61 31.0 3.78e-01 73.7% 79.5%
2fxaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 38.0 3.06e-01 90.8% 32.7%
3zeuB02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.57 41.0 3.29e-01 77.6% 43.6%
4gyiA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 37.0 3.54e-01 89.5% 60.2%
4bqnA02 1.10.10.2490 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.52 38.0 3.27e-01 77.6% 96.8%
3cexA00 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.52 37.0 2.94e-01 77.6% 92.4%
3u1nB01 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.51 42.0 2.89e-01 97.4% 71.6%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
138911 101.1.9.10 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF1233 0.79 57.0 5.93e-01 75.0% 87.1%
3587635 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.79 53.0 5.85e-01 76.3% 88.3%
3489262 196.1.1.1 ↗ alpha bundles › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › RGS 0.65 36.0 3.02e-01 72.4% 30.8%
3479795 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.59 41.0 2.73e-01 72.4% 31.9%
4963272 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 48.0 4.51e-01 100.0% 83.0%
4968330 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 40.0 3.52e-01 88.2% 49.6%
3291545 3859.1.1.0 ↗ alpha arrays › uncharacterized protein BT_1490 C-terminal domain › uncharacterized protein BT_1490 C-terminal domain › uncharacterized protein BT_1490 C-terminal domain 0.56 41.0 3.54e-01 78.9% 99.2%
3686185 2007.5.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase 0.55 37.0 2.67e-01 72.4% 90.9%
3505148 101.1.2.147 ↗ alpha arrays › HTH › HTH › winged helix domain › ORC4_C 0.53 37.0 3.32e-01 76.3% 61.7%
3287283 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 37.0 3.36e-01 76.3% 51.8%
3621947 196.1.1.1 ↗ alpha bundles › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › RGS 0.51 34.0 3.15e-01 71.1% 52.0%
3336996 3767.1.1.0 ↗ a+b two layers › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain 0.50 43.0 3.40e-01 100.0% 97.1%