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HQ698895.1__AEX56038.1__S-CBS4_gp071__00071

Bact-Vir

HQ698895.1__AEX56038.1__S-CBS4_gp071__00071

Identity

Accession:
HQ698895 ↗
Kingdom:
phage

Quality

70.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 56-118
PDB
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2h1eA02 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.82 58.0 6.12e-01 73.0% 87.3%
1dgsA04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.73 52.0 4.95e-01 74.6% 100.0%
1h6hA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.71 50.0 3.80e-01 74.6% 64.3%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 61.0 5.90e-01 100.0% 84.7%
8aa9A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 49.0 4.10e-01 74.6% 44.7%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 50.0 5.00e-01 100.0% 72.7%
1pfsA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 50.0 4.67e-01 76.2% 97.4%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 53.0 5.34e-01 100.0% 84.1%
2nlkA02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.68 50.0 3.31e-01 77.8% 61.2%
1vclA01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.68 53.0 4.12e-01 88.9% 65.8%
4ikbA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.66 46.0 3.66e-01 73.0% 69.0%
2e12A00 2.30.30.720 Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) 0.65 56.0 5.01e-01 100.0% 67.7%
1gd5A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.64 45.0 3.59e-01 74.6% 86.9%
1whlA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.63 56.0 4.91e-01 100.0% 80.0%
3pijA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.62 52.0 3.24e-01 95.2% 24.9%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 46.0 4.65e-01 100.0% 84.1%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 46.0 4.58e-01 100.0% 80.3%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 51.0 4.92e-01 100.0% 80.6%
4aw8A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 50.0 3.67e-01 95.2% 78.5%
2jkgA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.60 45.0 3.38e-01 92.1% 31.5%
3dcxA00 2.30.29.50 Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain 0.60 47.0 3.92e-01 88.9% 89.7%
8jx6A02 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.60 51.0 4.35e-01 96.8% 100.0%
2llgA00 2.60.40.1240 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 53.0 4.05e-01 100.0% 85.3%
4nzrM02 2.160.20.180 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.58 42.0 3.10e-01 79.4% 95.1%
1ae2A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 40.0 3.73e-01 74.6% 100.0%
4kcaA02 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.58 49.0 3.05e-01 96.8% 29.5%
2k5vA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 47.0 4.14e-01 92.1% 80.6%
1lyvA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.58 45.0 2.98e-01 85.7% 63.3%
3qfgA00 2.60.40.1240 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 50.0 3.88e-01 100.0% 84.1%
1wthD01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.57 45.0 3.87e-01 88.9% 88.7%
6vp6A03 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 49.0 3.05e-01 93.7% 19.0%
2czoA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.57 42.0 3.46e-01 82.5% 93.8%
2l73A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.57 40.0 3.17e-01 74.6% 69.2%
4id2A00 2.40.128.510 Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4738 0.57 46.0 3.66e-01 92.1% 60.3%
3kxtA00 2.30.30.610 Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 0.56 43.0 4.51e-01 93.7% 96.4%
1ue6D00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 44.0 3.79e-01 90.5% 87.5%
2gu3A01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 42.0 4.17e-01 92.1% 80.0%
5bkaE01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 44.0 3.57e-01 92.1% 87.9%
3fyfA00 2.40.128.410 Mainly Beta › Beta Barrel › Lipocalin › 0.54 45.0 3.56e-01 100.0% 77.2%
5yzzC00 2.40.330.10 Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain 0.54 40.0 3.37e-01 81.0% 53.2%
1imvA01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.54 41.0 3.17e-01 88.9% 66.9%
5cflA02 3.40.50.12100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Stimulator of interferon genes protein 0.53 41.0 3.24e-01 87.3% 45.6%
1ar0A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 42.0 3.47e-01 90.5% 81.6%
2w9jA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.52 43.0 4.14e-01 93.7% 81.7%
1lj5A02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.52 45.0 3.46e-01 100.0% 70.8%
3iiiA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 44.0 2.85e-01 93.7% 39.5%
5t1dB00 3.10.390.20 Alpha Beta › Roll › SAND domain › Viral glycoprotein L 0.51 37.0 3.22e-01 76.2% 50.5%
4e4fA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.51 35.0 2.81e-01 73.0% 66.7%
6krwA01 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.51 38.0 2.54e-01 84.1% 49.5%
2hdwA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 39.0 2.74e-01 87.3% 36.1%
3nqzA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 39.0 3.70e-01 92.1% 82.1%
4dy0B02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.50 42.0 3.45e-01 98.4% 77.3%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.50 42.0 3.40e-01 100.0% 66.9%
3n4eA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.50 35.0 3.05e-01 73.0% 91.3%
ECOD (74)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3335092 4.8.1.1 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.80 57.0 5.57e-01 76.2% 71.4%
3212945 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.76 54.0 5.60e-01 98.4% 79.7%
5081844 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 52.0 4.26e-01 76.2% 45.8%
4982481 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.72 52.0 4.53e-01 76.2% 53.7%
4447486 2.1.1.26 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB 0.72 50.0 4.64e-01 73.0% 90.0%
3550699 4.8.1.10 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like 0.72 64.0 5.51e-01 100.0% 64.2%
3945427 2.1.1.26 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB 0.71 52.0 4.71e-01 77.8% 88.2%
3410370 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 61.0 5.88e-01 100.0% 84.3%
4101580 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.71 54.0 5.40e-01 100.0% 80.0%
4345080 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.69 53.0 5.31e-01 100.0% 81.5%
4091312 2.1.1.26 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB 0.69 49.0 4.48e-01 76.2% 87.1%
4975881 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 49.0 3.87e-01 76.2% 37.0%
3267804 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 62.0 5.27e-01 100.0% 85.0%
3914493 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.68 50.0 2.88e-01 77.8% 28.5%
3599172 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 52.0 5.19e-01 100.0% 80.0%
5032193 2.26.1.1 beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 0.67 48.0 4.00e-01 74.6% 98.1%
3867704 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.67 50.0 3.18e-01 79.4% 55.5%
4022560 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 48.0 3.59e-01 77.8% 54.1%
3615163 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 53.0 4.46e-01 87.3% 91.6%
4975882 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 46.0 3.90e-01 74.6% 45.5%
3608236 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.66 50.0 5.04e-01 100.0% 81.5%
3828614 4.1.1.158 beta barrels › SH3 › SH3 › SH3 › DUF3444 0.66 59.0 4.92e-01 100.0% 74.5%
3624046 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 54.0 4.42e-01 93.7% 52.5%
3306779 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.65 49.0 4.91e-01 100.0% 81.5%
4956351 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 50.0 3.01e-01 85.7% 22.5%
3612666 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 50.0 3.99e-01 84.1% 90.8%
3969377 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 52.0 4.92e-01 87.3% 95.9%
4292289 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.65 49.0 4.86e-01 100.0% 81.5%
143390 2.24.1.1 beta barrels › OB-fold › probable receptor YhhM › probable receptor YhhM › DUF2500 0.65 53.0 5.01e-01 90.5% 90.8%
3707461 218.1.1.2 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › Enolase_N 0.64 44.0 3.47e-01 71.4% 79.3%
4284764 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.64 48.0 4.84e-01 100.0% 81.5%
3972819 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 53.0 4.42e-01 96.8% 98.3%
4646632 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.64 49.0 4.89e-01 100.0% 81.5%
3707121 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 55.0 5.24e-01 96.8% 86.7%
3265170 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.63 47.0 4.74e-01 100.0% 81.5%
4982277 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.63 44.0 4.38e-01 73.0% 78.5%
3486847 4.1.1.284 beta barrels › SH3 › SH3 › SH3 › SBNO 0.63 54.0 4.66e-01 100.0% 61.0%
3255870 2.1.1.26 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB 0.63 52.0 4.38e-01 90.5% 71.4%
3472797 277.1.1.0 a+b two layers › PX domain › PX domain › PX domain 0.63 52.0 4.00e-01 90.5% 77.1%
4201878 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.63 47.0 4.68e-01 100.0% 81.5%
5020457 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 44.0 3.78e-01 77.8% 79.1%
3709896 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 55.0 5.01e-01 100.0% 78.8%
4051625 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.62 46.0 4.63e-01 100.0% 81.5%
151337 4059.1.1.0 a+b complex topology › Serpins › Serpins › Serpins 0.61 48.0 3.01e-01 90.5% 45.3%
5032255 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 50.0 4.85e-01 98.4% 82.9%
3577821 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.61 39.0 2.55e-01 88.9% 14.2%
3737863 708.1.2.11 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › STEEP1 0.61 50.0 4.27e-01 92.1% 67.6%
3627777 71.1.1.19 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › PF25898 0.60 50.0 3.46e-01 96.8% 76.2%
2410174 4059.1.1.0 a+b complex topology › Serpins › Serpins › Serpins 0.60 46.0 3.08e-01 87.3% 77.4%
5076488 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 49.0 4.21e-01 90.5% 89.0%
3393084 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.60 51.0 4.74e-01 100.0% 75.0%
3988067 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 47.0 4.27e-01 95.2% 63.5%
3852230 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.60 47.0 2.91e-01 90.5% 57.2%
3220940 2.1.1.28 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › mRNA_cap_C 0.59 43.0 3.51e-01 79.4% 57.6%
5050059 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 48.0 3.94e-01 90.5% 76.5%
4031151 4056.1.1.0 beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.58 47.0 4.49e-01 100.0% 78.7%
4965392 802.1.1.0 a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 0.58 41.0 4.44e-01 74.6% 94.0%
1298711 9.1.1.13 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › ZinT 0.58 48.0 3.49e-01 95.2% 63.2%
4958552 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 41.0 3.48e-01 77.8% 50.4%
3375524 2.1.1.229 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 0.57 45.0 3.70e-01 87.3% 81.7%
4255495 4.11.1.2 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.56 46.0 3.09e-01 90.5% 28.4%
3882652 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 45.0 3.67e-01 92.1% 86.2%
2544590 2.1.1.58 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF35_N 0.56 39.0 3.28e-01 74.6% 57.6%
3542604 2.1.1.76 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.55 44.0 3.57e-01 92.1% 80.0%
4256610 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.55 47.0 3.69e-01 100.0% 94.5%
5023617 4111.1.1.2 a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC 0.55 47.0 3.69e-01 100.0% 45.2%
4182876 4964.1.1.2 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol 0.54 42.0 2.99e-01 85.7% 30.7%
3798282 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.54 43.0 3.52e-01 90.5% 86.4%
None 0.53 46.0 2.94e-01 100.0% 27.9%
3889571 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.53 43.0 3.48e-01 90.5% 82.9%
3911919 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.53 43.0 2.77e-01 96.8% 47.7%
3741071 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.52 41.0 3.31e-01 92.1% 75.7%
4106397 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.50 43.0 4.05e-01 100.0% 80.0%
3948020 283.2.1.1 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 0.50 36.0 3.18e-01 82.5% 80.9%