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HQ698895.1__AEX56056.1__S-CBS4_gp089__00089
Bact-VirHQ698895.1__AEX56056.1__S-CBS4_gp089__00089
Identity
- Accession:
- HQ698895 ↗
- Kingdom:
- phage
Quality
86.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 59-139
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kavA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.69 | 47.0 | 4.32e-01 | 79.0% | 55.9% |
| 3okqA00 | 1.20.58.1540 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Actin interacting protein 3, C-terminal domain | 0.66 | 43.0 | 3.67e-01 | 72.8% | 43.2% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.63 | 44.0 | 4.09e-01 | 72.8% | 59.8% |
| 3sjqC00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.63 | 43.0 | 4.42e-01 | 71.6% | 78.8% |
| 7d3uC01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 47.0 | 4.29e-01 | 84.0% | 73.8% |
| 6a3kA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.59 | 54.0 | 4.60e-01 | 100.0% | 86.8% |
| 2qtqB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.59 | 47.0 | 3.63e-01 | 88.9% | 72.1% |
| 2i7uA00 | 6.10.250.1010 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.59 | 36.0 | 4.05e-01 | 72.8% | 80.6% |
| 2dpmA02 | 1.10.1020.10 | Mainly Alpha › Orthogonal Bundle › Adenine-specific Methyltransferase; domain 2 › Adenine-specific Methyltransferase, Domain 2 | 0.56 | 42.0 | 3.94e-01 | 81.5% | 64.1% |
| 4ri6A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.56 | 51.0 | 4.47e-01 | 100.0% | 84.0% |
| 6lw5A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.55 | 50.0 | 3.38e-01 | 100.0% | 80.1% |
| 3lxzB02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.54 | 49.0 | 4.09e-01 | 100.0% | 71.0% |
| 2iw3A02 | 1.20.1390.20 | Mainly Alpha › Up-down Bundle › PWI domain › | 0.54 | 35.0 | 3.43e-01 | 92.6% | 58.9% |
| 3gb8A01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.54 | 47.0 | 2.83e-01 | 98.8% | 17.0% |
| 3cbuA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.54 | 48.0 | 4.10e-01 | 100.0% | 69.4% |
| 3nftA00 | 1.20.1710.10 | Mainly Alpha › Up-down Bundle › IpaD-like › IpaD-like | 0.54 | 41.0 | 2.92e-01 | 84.0% | 43.1% |
| 3iqcA00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.54 | 48.0 | 4.25e-01 | 100.0% | 74.8% |
| 3gzsA00 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.54 | 46.0 | 2.89e-01 | 100.0% | 33.1% |
| 3kezA01 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.54 | 48.0 | 3.44e-01 | 100.0% | 87.7% |
| 1wgwA00 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.53 | 46.0 | 4.37e-01 | 98.8% | 90.9% |
| 3u9jA00 | 1.20.120.520 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like | 0.53 | 46.0 | 3.78e-01 | 100.0% | 71.3% |
| 2jx0A00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.53 | 47.0 | 4.05e-01 | 100.0% | 80.9% |
| 7nc3F01 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.53 | 48.0 | 4.27e-01 | 100.0% | 92.1% |
| 1axdA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.52 | 45.0 | 4.00e-01 | 100.0% | 87.0% |
| 3ehmA03 | 1.20.120.840 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SusD-like, tetratrico peptide repeats domain | 0.52 | 44.0 | 3.92e-01 | 93.8% | 96.6% |
| 1xdxA01 | 3.30.1140.40 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Tctex-1 | 0.52 | 37.0 | 3.48e-01 | 75.3% | 100.0% |
| 2dqlA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 35.0 | 3.17e-01 | 70.4% | 87.0% |
| 1hqoA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.52 | 44.0 | 3.87e-01 | 100.0% | 85.5% |
| 4a4aA04 | 1.20.120.670 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › N-acetyl-b-d-glucoasminidase | 0.51 | 46.0 | 3.13e-01 | 100.0% | 49.3% |
| 3dzaA01 | 1.20.120.1940 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YfdX protein domain | 0.51 | 46.0 | 4.08e-01 | 100.0% | 83.8% |
| 4krdB00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.51 | 41.0 | 3.18e-01 | 90.1% | 87.9% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4974774 | 1075.1.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain | 0.65 | 53.0 | 3.87e-01 | 90.1% | 77.6% |
| 3603229 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.63 | 48.0 | 4.78e-01 | 82.7% | 76.5% |
| 4338968 | 1046.1.1.1 ↗ | alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 | 0.62 | 49.0 | 3.97e-01 | 82.7% | 47.6% |
| 3396511 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.61 | 48.0 | 4.55e-01 | 100.0% | 71.6% |
| 4296172 | 1046.1.1.1 ↗ | alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 | 0.61 | 47.0 | 3.79e-01 | 82.7% | 45.2% |
| 4991918 | 632.18.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › hypothetical protein PA2901 › hypothetical protein PA2901 | 0.59 | 35.0 | 3.23e-01 | 72.8% | 43.8% |
| 3236153 | 5001.1.1.59 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Sri | 0.57 | 44.0 | 2.99e-01 | 82.7% | 30.2% |
| 3869984 | 3978.1.1.1 ↗ | alpha complex topology › Integral membrane Acyl-CoA desaturase › Integral membrane Acyl-CoA desaturase › Integral membrane Acyl-CoA desaturase › FA_desaturase | 0.57 | 49.0 | 3.32e-01 | 100.0% | 65.1% |
| 3625219 | 109.17.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Proteasome activator BLM10 › Proteasome activator BLM10 › DUF3437,BLM10_mid | 0.56 | 49.0 | 2.73e-01 | 100.0% | 25.8% |
| 3584278 | 109.17.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Proteasome activator BLM10 › Proteasome activator BLM10 › HEAT_PSME4_mid, HEAT_PSME4 | 0.56 | 51.0 | 2.74e-01 | 100.0% | 11.6% |
| 3800649 | 109.17.1.6 ↗ | alpha superhelices › Repetitive alpha hairpins › Proteasome activator BLM10 › Proteasome activator BLM10 › PSME4_C, HEAT_PSME4_mid, HEAT_PSME4 | 0.56 | 51.0 | 2.71e-01 | 100.0% | 10.0% |
| 4003580 | 109.17.1.6 ↗ | alpha superhelices › Repetitive alpha hairpins › Proteasome activator BLM10 › Proteasome activator BLM10 › PSME4_C, HEAT_PSME4_mid, HEAT_PSME4 | 0.55 | 50.0 | 2.73e-01 | 100.0% | 10.7% |
| 3277363 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.53 | 48.0 | 4.04e-01 | 100.0% | 79.3% |
| 3599532 | 1065.1.1.0 ↗ | alpha bundles › SPX domain › SPX domain › SPX domain | 0.53 | 46.0 | 3.71e-01 | 98.8% | 84.2% |
| 3433019 | 101.1.1.65 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 | 0.53 | 38.0 | 3.36e-01 | 100.0% | 48.5% |
| 3277286 | 192.10.1.0 ↗ | alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain | 0.53 | 37.0 | 3.91e-01 | 82.7% | 84.3% |
| 3527488 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.53 | 45.0 | 3.42e-01 | 92.6% | 83.2% |
| 3412785 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.53 | 42.0 | 2.64e-01 | 88.9% | 63.7% |
| 3260131 | 109.4.1.414 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MMS19_N | 0.53 | 46.0 | 3.16e-01 | 98.8% | 37.3% |
| 3499899 | 106.1.1.9 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › FIBP | 0.51 | 41.0 | 3.11e-01 | 88.9% | 43.4% |
| 3612243 | 609.1.1.0 ↗ | alpha bundles › Domain of poly(ADP-ribose) polymerase › Domain of poly(ADP-ribose) polymerase › Domain of poly(ADP-ribose) polymerase | 0.51 | 44.0 | 4.09e-01 | 100.0% | 76.0% |
| 3890890 | 109.4.1.342 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SBF2 | 0.51 | 45.0 | 3.17e-01 | 100.0% | 68.9% |