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HQ698895.1__AEX56071.1__S-CBS4_gp104__00104
Bact-VirHQ698895.1__AEX56071.1__S-CBS4_gp104__00104
Identity
- Accession:
- HQ698895 ↗
- Kingdom:
- phage
Quality
92.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-74
Domain cluster:
representative
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ffgA00 | 3.30.720.20 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 | 0.76 | 68.0 | 6.56e-01 | 100.0% | 98.8% |
| 3jtzA00 | 3.30.160.390 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain | 0.68 | 59.0 | 5.75e-01 | 97.1% | 89.6% |
| 4kcaA02 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.66 | 46.0 | 2.83e-01 | 71.4% | 32.1% |
| 1vlaA01 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.64 | 32.0 | 4.02e-01 | 70.0% | 81.0% |
| 1fx7B03 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.63 | 45.0 | 4.32e-01 | 75.7% | 96.2% |
| 4okcA01 | 2.90.10.10 | Mainly Beta › Orthogonal Prism › Agglutinin, subunit A › Bulb-type lectin domain | 0.61 | 43.0 | 4.38e-01 | 72.9% | 81.2% |
| 3eweA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.61 | 42.0 | 2.87e-01 | 71.4% | 44.7% |
| 1yw4B00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.61 | 48.0 | 3.22e-01 | 88.6% | 77.3% |
| 2bhoA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.61 | 49.0 | 4.29e-01 | 90.0% | 92.7% |
| 3v9fA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.61 | 42.0 | 2.74e-01 | 71.4% | 94.5% |
| 3apqA02 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.60 | 46.0 | 3.94e-01 | 82.9% | 95.7% |
| 4jpqA00 | 2.60.40.1190 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 48.0 | 3.40e-01 | 88.6% | 52.1% |
| 2ogqA01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.60 | 41.0 | 3.41e-01 | 71.4% | 81.7% |
| 4kg0A01 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.60 | 51.0 | 4.00e-01 | 97.1% | 91.5% |
| 4pbpA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 50.0 | 3.64e-01 | 97.1% | 50.5% |
| 2fhxA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.59 | 42.0 | 2.97e-01 | 77.1% | 48.6% |
| 1i3zA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.58 | 46.0 | 4.11e-01 | 88.6% | 94.2% |
| 4ifaA01 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.57 | 43.0 | 2.91e-01 | 81.4% | 61.6% |
| 1sgoA01 | 3.30.2280.10 | Alpha Beta › 2-Layer Sandwich › copper amine oxidase-like fold › Hypothetical protein (hspc210) | 0.57 | 47.0 | 4.13e-01 | 92.9% | 66.7% |
| 3lhnA00 | 2.40.128.640 | Mainly Beta › Beta Barrel › Lipocalin › | 0.57 | 39.0 | 3.42e-01 | 71.4% | 77.6% |
| 2e63A00 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.57 | 48.0 | 3.70e-01 | 97.1% | 89.4% |
| 1hywA00 | 3.30.1580.10 | Alpha Beta › 2-Layer Sandwich › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W | 0.56 | 39.0 | 4.13e-01 | 87.1% | 87.9% |
| 7c38B01 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.56 | 47.0 | 3.09e-01 | 94.3% | 88.9% |
| 4a4yA01 | 2.60.200.50 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.56 | 47.0 | 4.28e-01 | 95.7% | 78.6% |
| 3fm8A00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.56 | 50.0 | 4.46e-01 | 100.0% | 84.7% |
| 3p34A02 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.56 | 42.0 | 3.76e-01 | 81.4% | 57.7% |
| 4qwoB00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.56 | 42.0 | 3.51e-01 | 84.3% | 59.1% |
| 5t5lA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 47.0 | 3.39e-01 | 100.0% | 69.0% |
| 4jpdA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.55 | 46.0 | 4.05e-01 | 94.3% | 78.0% |
| 3hdoA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.55 | 42.0 | 3.52e-01 | 84.3% | 64.6% |
| 2x49A01 | 3.40.30.60 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 | 0.55 | 41.0 | 3.78e-01 | 81.4% | 81.2% |
| 1ospO02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.55 | 45.0 | 3.61e-01 | 91.4% | 76.7% |
| 3hbkA00 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.54 | 45.0 | 3.28e-01 | 100.0% | 70.6% |
| 1zhxA03 | 2.40.160.120 | Mainly Beta › Beta Barrel › Porin › | 0.54 | 39.0 | 2.91e-01 | 78.6% | 52.4% |
| 3o7bA00 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.54 | 46.0 | 3.29e-01 | 97.1% | 41.2% |
| 5m8cB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 44.0 | 2.81e-01 | 90.0% | 46.3% |
| 5hp6A01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 43.0 | 2.86e-01 | 92.9% | 99.4% |
| 4wjsA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 43.0 | 2.71e-01 | 88.6% | 35.5% |
| 1nr0A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 44.0 | 2.96e-01 | 94.3% | 93.0% |
| 7razA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 41.0 | 3.88e-01 | 97.1% | 69.4% |
| 3mixA01 | 3.40.30.60 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 | 0.52 | 39.0 | 3.38e-01 | 84.3% | 65.0% |
| 4nsxA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 44.0 | 2.89e-01 | 100.0% | 68.6% |
| 3zfnA02 | 2.30.140.40 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Pestivirus Npro endopeptidase C53, interaction domain | 0.51 | 35.0 | 3.74e-01 | 71.4% | 100.0% |
| 2x8fA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.51 | 40.0 | 2.59e-01 | 85.7% | 38.8% |
| 6u1oA01 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.50 | 41.0 | 3.62e-01 | 94.3% | 86.2% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3401697 | 4357.1.1.4 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE_3 | 0.70 | 51.0 | 4.79e-01 | 77.1% | 81.2% |
| 3941423 | 252.2.1.5 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_3 | 0.70 | 56.0 | 5.36e-01 | 91.4% | 90.6% |
| 3914000 | 4357.1.1.4 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE_3 | 0.69 | 51.0 | 4.72e-01 | 78.6% | 75.6% |
| 3843361 | 5.1.4.269 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, HELP, Beta-prop_EML | 0.69 | 49.0 | 3.06e-01 | 74.3% | 94.8% |
| 3942150 | 252.2.1.5 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_3 | 0.67 | 53.0 | 4.98e-01 | 91.4% | 83.3% |
| 3984933 | 252.2.1.5 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_3 | 0.66 | 54.0 | 5.07e-01 | 92.9% | 77.8% |
| 3961067 | 66.1.1.1 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske | 0.66 | 52.0 | 4.20e-01 | 84.3% | 83.8% |
| 4975637 | 241.2.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like | 0.66 | 59.0 | 5.67e-01 | 98.6% | 87.5% |
| 4216435 | 3735.1.1.12 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › RHS_repeat, DUF6531, TEN_YD-shell | 0.63 | 46.0 | 2.77e-01 | 77.1% | 13.8% |
| 3694479 | 5.1.4.74 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vps16_N | 0.61 | 43.0 | 2.62e-01 | 74.3% | 78.9% |
| 3889383 | 10.1.1.23 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Neuralized | 0.60 | 50.0 | 3.78e-01 | 92.9% | 78.9% |
| 4253206 | 4.1.1.127 ↗ | beta barrels › SH3 › SH3 › SH3 › DtxR | 0.60 | 49.0 | 4.56e-01 | 91.4% | 91.1% |
| 3074009 | 9.1.1.31 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › VtrC | 0.59 | 45.0 | 3.65e-01 | 81.4% | 60.2% |
| 4027520 | 5.1.4.262 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_CAF1B_HIR1 | 0.59 | 49.0 | 3.03e-01 | 94.3% | 93.7% |
| 3915890 | 10.1.1.5 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Pentaxin | 0.58 | 51.0 | 4.39e-01 | 97.1% | 73.6% |
| 3965099 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.56 | 46.0 | 4.04e-01 | 91.4% | 78.1% |
| 3829251 | 9.1.1.34 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › PAP_fibrillin | 0.56 | 45.0 | 3.48e-01 | 92.9% | 96.0% |
| 3768290 | 391.1.2.11 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC2L_2nd | 0.55 | 38.0 | 4.10e-01 | 84.3% | 83.3% |
| 3272708 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.55 | 41.0 | 3.92e-01 | 81.4% | 68.8% |
| 3832420 | 5.1.4.414 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Lgl_C | 0.55 | 44.0 | 2.74e-01 | 90.0% | 87.0% |
| 3215598 | 391.1.1.13 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › VWC2L_2nd | 0.55 | 37.0 | 4.16e-01 | 88.6% | 90.9% |
| 2980428 | 210.1.1.1 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome | 0.54 | 44.0 | 3.10e-01 | 90.0% | 59.7% |
| 4960591 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 47.0 | 3.07e-01 | 100.0% | 90.7% |
| 3465398 | 3939.1.1.208 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › APG6 | 0.54 | 46.0 | 3.11e-01 | 97.1% | 59.7% |
| 5015285 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 38.0 | 2.44e-01 | 74.3% | 22.2% |
| 3239831 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.54 | 43.0 | 3.51e-01 | 90.0% | 47.1% |
| 3628522 | 5.1.4.489 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Prenyltrans | 0.54 | 43.0 | 2.47e-01 | 90.0% | 41.3% |
| 3285549 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.53 | 45.0 | 3.37e-01 | 100.0% | 65.5% |
| 3489849 | 5.1.4.74 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vps16_N | 0.53 | 41.0 | 2.46e-01 | 81.4% | 61.9% |
| 3407414 | 5.1.4.269 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, HELP, Beta-prop_EML | 0.53 | 44.0 | 2.94e-01 | 95.7% | 45.6% |
| 3207083 | 5.1.4.74 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vps16_N | 0.53 | 46.0 | 2.90e-01 | 98.6% | 75.5% |
| 4958957 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.52 | 43.0 | 3.44e-01 | 94.3% | 91.3% |
| 3912315 | 5.1.4.371 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Frtz | 0.52 | 41.0 | 2.54e-01 | 88.6% | 81.3% |
| 3999013 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 43.0 | 2.76e-01 | 100.0% | 62.4% |
| 4655659 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 38.0 | 2.62e-01 | 80.0% | 73.0% |
| 3222413 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.51 | 43.0 | 3.66e-01 | 95.7% | 56.7% |
| 5072965 | 2002.1.1.57 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › URO-D | 0.51 | 36.0 | 2.32e-01 | 72.9% | 31.8% |
| 3970136 | 241.2.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like | 0.51 | 41.0 | 3.68e-01 | 94.3% | 77.1% |