Back to structures

HQ698922.4__AHE63464.1__ZZ1p0050__00050

Bact-Vir

HQ698922.4__AHE63464.1__ZZ1p0050__00050

Identity

Accession:
HQ698922 ↗
Kingdom:
phage

Quality

87.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-105
PDB
CATH (64)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2kxgA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.76 58.0 5.90e-01 82.1% 81.1%
1wnhA02 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.75 57.0 5.26e-01 80.0% 66.7%
7pkwA01 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.75 53.0 5.17e-01 73.7% 79.6%
2fxtA00 3.10.450.240 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.73 53.0 4.20e-01 76.8% 68.8%
4n6tA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.72 54.0 5.82e-01 83.2% 93.7%
2l4vA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.70 53.0 4.73e-01 85.3% 57.0%
7c5yA02 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 50.0 4.22e-01 75.8% 94.8%
2cw9A00 3.10.450.240 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 56.0 4.52e-01 88.4% 72.5%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 48.0 5.25e-01 84.2% 92.1%
3a76A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 52.0 4.63e-01 84.2% 87.8%
3fzxA00 2.40.360.20 Mainly Beta › Beta Barrel › YmcC-like fold › 0.67 50.0 3.87e-01 80.0% 59.9%
5cxoB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 53.0 4.70e-01 85.3% 86.6%
5ig0A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 49.0 4.42e-01 77.9% 87.8%
3e99A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 51.0 4.43e-01 83.2% 89.2%
2lyxA00 3.10.450.390 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF3889 0.66 49.0 5.12e-01 83.2% 87.4%
2i9wA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 47.0 3.81e-01 74.7% 80.1%
3b7cA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 49.0 4.52e-01 78.9% 93.3%
3ke7B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 50.0 4.47e-01 82.1% 85.0%
3soyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 48.0 4.24e-01 80.0% 83.8%
3wa2X01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 48.0 4.98e-01 92.6% 87.4%
3qz4A00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.64 56.0 3.99e-01 100.0% 43.5%
3ub1D02 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 58.0 5.45e-01 98.9% 85.1%
3rgaA01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 49.0 4.41e-01 83.2% 88.0%
8aa0E01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.63 57.0 3.99e-01 100.0% 48.7%
4h3uA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 49.0 4.47e-01 84.2% 86.2%
4ec6A00 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 53.0 5.08e-01 91.6% 95.4%
3hzpA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 56.0 5.09e-01 97.9% 92.1%
1of5A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 56.0 4.80e-01 98.9% 78.6%
3eyrA00 3.15.10.40 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Uncharacterised protein PF07273 family, DUF1439 0.63 48.0 4.00e-01 82.1% 51.5%
4j8tA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 49.0 4.45e-01 84.2% 94.5%
7f13A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 47.0 4.18e-01 82.1% 77.8%
3robA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 48.0 4.33e-01 83.2% 88.5%
2r4iA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 47.0 4.33e-01 81.1% 91.1%
1tuhA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 47.0 4.31e-01 83.2% 86.3%
3dm8A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 48.0 4.33e-01 84.2% 90.4%
3fsdA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 48.0 4.43e-01 83.2% 99.2%
1s5aB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 47.0 4.18e-01 83.2% 83.2%
1h2iA01 3.30.390.80 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › DNA repair protein Rad52/59/22 0.62 44.0 3.79e-01 73.7% 61.5%
2xglA00 3.10.450.300 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › YebF/Colicin-M immunity protein 0.61 45.0 4.64e-01 77.9% 87.9%
3grdA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 47.0 4.24e-01 82.1% 86.4%
3kspA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 47.0 4.32e-01 85.3% 89.1%
3fkaB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 47.0 4.41e-01 84.2% 91.7%
4pswB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 54.0 3.61e-01 98.9% 39.6%
6xrbA01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.60 51.0 4.53e-01 97.9% 64.0%
1bp1A01 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.60 46.0 3.80e-01 83.2% 66.7%
1tu1A00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.60 48.0 4.22e-01 97.9% 58.3%
3ec9A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 46.0 4.15e-01 82.1% 87.6%
2qguA01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 46.0 4.55e-01 82.1% 95.0%
4dduA07 2.60.510.20 Mainly Beta › Sandwich › EV matrix protein fold › 0.59 41.0 3.93e-01 70.5% 71.0%
7mhuA01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.59 52.0 3.52e-01 100.0% 37.1%
2bngC00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 50.0 4.44e-01 93.7% 87.1%
2rfrA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 50.0 4.31e-01 94.7% 89.0%
3g8zA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 45.0 4.14e-01 83.2% 88.3%
1v2bB00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.59 47.0 4.14e-01 98.9% 57.0%
4orlA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 46.0 4.41e-01 85.3% 100.0%
3bb9B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 42.0 3.91e-01 76.8% 87.2%
4bg7A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.57 40.0 4.00e-01 80.0% 70.4%
3fgyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 43.0 3.85e-01 81.1% 85.2%
2eenA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.54 45.0 3.75e-01 93.7% 53.1%
3atsA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 47.0 4.44e-01 95.8% 100.0%
5uj1A03 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.54 37.0 3.13e-01 71.6% 77.8%
4g79A00 2.170.210.20 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain 0.54 41.0 3.74e-01 84.2% 92.5%
2bbhA01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.53 36.0 3.09e-01 70.5% 53.0%
1l3aA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.51 39.0 3.26e-01 82.1% 78.3%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3591628 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.77 59.0 5.47e-01 80.0% 84.3%
3408261 243.3.1.35 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF229 0.72 56.0 4.96e-01 83.2% 64.7%
3399804 206.1.1.55 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › EcKL 0.72 52.0 3.44e-01 75.8% 30.4%
3205088 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.71 57.0 5.24e-01 85.3% 75.8%
3185390 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.70 55.0 5.15e-01 83.2% 73.9%
3425790 243.3.1.19 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 0.69 53.0 5.32e-01 81.1% 93.7%
2765234 243.3.1.12 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › SQAPI 0.69 57.0 5.66e-01 88.4% 94.8%
3801133 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.68 52.0 4.71e-01 81.1% 85.9%
4021124 5.1.5.88 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Nucleoporin_N 0.68 61.0 3.80e-01 100.0% 46.2%
5003871 243.1.1.28 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.66 50.0 4.45e-01 81.1% 87.9%
3970236 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.66 50.0 4.46e-01 81.1% 88.5%
4950139 243.1.1.25 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 0.66 50.0 4.56e-01 80.0% 92.0%
4193401 243.1.1.34 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › YchJ_M-like 0.66 51.0 4.87e-01 83.2% 90.9%
4623792 243.1.1.34 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › YchJ_M-like 0.66 48.0 4.43e-01 77.9% 97.6%
3251351 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.66 50.0 4.69e-01 82.1% 95.0%
4074364 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.65 52.0 4.75e-01 87.4% 83.1%
3432106 243.3.1.19 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 0.65 59.0 5.45e-01 100.0% 82.8%
4018556 330.1.1.4 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Rad52_Rad22 0.64 45.0 3.77e-01 71.6% 58.7%
3961157 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.64 46.0 4.27e-01 76.8% 59.2%
3924297 243.1.1.12 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.64 49.0 4.82e-01 81.1% 89.0%
3920557 4210.1.1.3 a+b two layers › WGR domain › WGR domain › WGR domain › PF26166 0.64 50.0 5.06e-01 88.4% 85.3%
3243080 243.5.1.0 a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region 0.64 48.0 4.75e-01 81.1% 76.0%
4940463 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.63 55.0 4.87e-01 95.8% 90.4%
3717566 5.1.3.28 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.63 56.0 4.05e-01 97.9% 56.7%
3591282 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.63 47.0 4.36e-01 78.9% 90.8%
3287863 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.62 49.0 4.39e-01 82.1% 88.5%
3265962 243.3.1.48 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › GlfB_C 0.62 45.0 3.63e-01 76.8% 43.2%
3966459 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.62 49.0 4.35e-01 96.8% 58.6%
2722108 243.1.1.67 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Cds6_C 0.62 43.0 4.02e-01 73.7% 86.3%
3349375 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.61 53.0 4.72e-01 95.8% 88.1%
3287916 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.61 47.0 4.27e-01 83.2% 91.5%
3430924 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.61 49.0 4.13e-01 87.4% 75.6%
137634 243.1.1.25 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 0.61 47.0 4.32e-01 85.3% 89.1%
3588474 243.1.1.17 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TpcC 0.60 54.0 5.01e-01 97.9% 93.3%
3403847 9.1.1.47 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Chitin_bind_4 0.60 42.0 4.32e-01 77.9% 76.7%
2717340 881.1.1.4 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DcrB 0.60 51.0 4.42e-01 97.9% 59.3%
3624756 243.1.1.12 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.60 46.0 4.54e-01 84.2% 85.6%
73715 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.60 45.0 4.06e-01 82.1% 84.8%
1388524 243.17.1.1 a+b two layers › Cystatin-like › C-terminal domain of PatG › C-terminal domain of PatG › PatG_C 0.59 46.0 4.19e-01 84.2% 74.6%
4648747 243.3.1.8 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3889 0.59 43.0 4.64e-01 76.8% 97.3%
2410020 881.1.1.4 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DcrB 0.59 48.0 4.22e-01 98.9% 58.1%
5058112 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.59 48.0 4.21e-01 97.9% 58.1%
5056633 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.59 50.0 4.01e-01 91.6% 63.9%
5022489 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.58 50.0 3.30e-01 100.0% 29.2%
5022156 243.1.1.25 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 0.58 50.0 4.44e-01 95.8% 87.7%
3805100 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.58 50.0 4.06e-01 98.9% 49.5%
3169357 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.58 39.0 3.73e-01 82.1% 59.1%
4940119 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.58 46.0 4.04e-01 97.9% 54.8%
4965879 881.1.1.44 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF6517 0.57 43.0 3.58e-01 97.9% 42.7%
3258590 4210.1.1.0 a+b two layers › WGR domain › WGR domain › WGR domain 0.57 41.0 4.10e-01 81.1% 74.7%
3386770 243.1.1.8 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › MlaC 0.57 42.0 3.53e-01 78.9% 83.6%
3785645 5.1.4.317 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, CAF1C_H4-bd, Beta-prop_NOL10_N 0.56 47.0 3.18e-01 94.7% 34.7%
5028155 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.56 45.0 3.95e-01 97.9% 56.1%
3834272 5.1.5.96 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_3 0.55 48.0 3.49e-01 100.0% 58.3%
6689 4210.1.1.1 a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.55 48.0 4.40e-01 98.9% 73.8%
4928436 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.55 45.0 3.93e-01 97.9% 57.9%
3273247 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.55 45.0 3.94e-01 97.9% 58.0%
3690464 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.55 41.0 3.31e-01 81.1% 39.5%
5044863 331.9.1.0 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.54 37.0 3.39e-01 82.1% 52.3%
3427602 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.54 47.0 3.33e-01 100.0% 38.4%
3440964 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.52 46.0 3.21e-01 100.0% 38.4%
3853251 2492.1.1.19 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › STIL_N 0.51 40.0 3.22e-01 88.4% 74.4%
5037261 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.51 38.0 3.33e-01 82.1% 50.3%