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HQ728264.1__AEJ81422.1__X__00046

Bact-Vir

HQ728264.1__AEJ81422.1__X__00046

Identity

Accession:
HQ728264 ↗
Kingdom:
phage

Quality

62.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chaseviridae› Loessnervirus› Erwinia_phage_vB_EamM-Y2

TaxID: 1051676

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 22-125
PDB
Domain cluster: representative
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4kjmA02 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.68 33.0 4.42e-01 89.4% 89.1%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.61 31.0 4.01e-01 98.1% 94.2%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 33.0 3.88e-01 91.3% 75.3%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 31.0 4.08e-01 100.0% 100.0%
4adiA02 3.30.67.20 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Rubella membrane glycoprotein E1, domain 2 0.59 38.0 4.12e-01 100.0% 77.3%
1srqA01 3.30.1120.160 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.59 50.0 4.63e-01 96.2% 87.0%
3tu3B01 3.30.720.80 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.57 32.0 3.70e-01 99.0% 75.0%
2fjrA02 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.57 31.0 3.05e-01 94.2% 46.0%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 30.0 3.69e-01 90.4% 82.8%
4cc9A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 39.0 2.80e-01 74.0% 83.7%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.54 28.0 3.73e-01 98.1% 96.3%
3tk9A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.53 30.0 3.05e-01 100.0% 53.3%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 39.0 4.01e-01 100.0% 83.3%
1n27A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 35.0 3.61e-01 78.8% 72.9%
5flwA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.52 41.0 3.02e-01 87.5% 79.8%
1xkiA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 42.0 3.96e-01 88.5% 100.0%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 32.0 3.62e-01 93.3% 82.3%
1vq8Q00 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.50 30.0 3.16e-01 99.0% 65.3%
ECOD (38)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4015071 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 35.0 4.20e-01 98.1% 77.1%
3617111 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.64 38.0 4.05e-01 78.8% 67.8%
3276143 4026.1.1.0 ↗ a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.63 56.0 4.68e-01 98.1% 72.8%
3391558 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.60 35.0 3.94e-01 77.9% 73.8%
3631797 5.1.4.6 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 0.60 44.0 3.18e-01 76.0% 92.1%
3877485 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.60 33.0 3.66e-01 76.9% 65.9%
3576128 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 38.0 3.71e-01 77.9% 58.3%
3576438 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 34.0 3.70e-01 91.3% 66.7%
3275404 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 33.0 4.06e-01 89.4% 93.3%
3261395 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 32.0 4.02e-01 99.0% 93.1%
3389169 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.59 34.0 3.72e-01 77.9% 69.4%
4058174 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.59 33.0 3.95e-01 91.3% 86.2%
3535278 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 30.0 3.80e-01 85.6% 85.0%
3562168 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.58 34.0 3.61e-01 77.9% 65.6%
3907619 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.58 33.0 3.66e-01 77.9% 69.4%
3476179 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 36.0 3.81e-01 84.6% 69.5%
3854862 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.58 34.0 3.54e-01 77.9% 62.1%
3474715 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 33.0 3.98e-01 70.2% 89.2%
3486327 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 33.0 4.01e-01 82.7% 95.0%
3230083 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.57 35.0 3.70e-01 77.9% 68.9%
3879064 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.57 33.0 3.56e-01 77.9% 65.6%
3486495 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 38.0 3.27e-01 87.5% 41.1%
4547820 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 38.0 3.84e-01 84.6% 68.6%
4147056 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.56 33.0 3.44e-01 77.9% 61.0%
3584224 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.56 33.0 3.35e-01 77.9% 57.1%
3816322 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.56 42.0 2.94e-01 79.8% 85.1%
3308887 5.1.3.4 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › WD40 0.55 39.0 2.62e-01 74.0% 68.7%
3222917 220.1.1.29 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_3 0.55 38.0 3.14e-01 100.0% 39.5%
3695663 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 38.0 3.33e-01 74.0% 98.2%
4021296 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 37.0 3.21e-01 71.2% 90.2%
3249876 5.1.4.254 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_NOL10_N 0.54 39.0 2.84e-01 76.0% 90.3%
3485965 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 30.0 3.66e-01 95.2% 93.3%
3999725 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 33.0 3.55e-01 76.9% 74.1%
3708849 10.1.1.56 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C 0.53 38.0 2.92e-01 75.0% 78.8%
3881124 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.52 32.0 3.43e-01 78.8% 70.0%
3380722 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.51 39.0 2.98e-01 81.7% 84.2%
5032178 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.51 37.0 2.86e-01 100.0% 33.6%
3832937 5.1.3.65 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 0.51 39.0 2.83e-01 85.6% 92.2%
D2 high residues 140-192
PDB