←Back to structures

HQ728266.1__AEJ81561.1__X__00042

Bact-Vir

HQ728266.1__AEJ81561.1__X__00042

Identity

Accession:
HQ728266 ↗
Kingdom:
phage

Quality

90.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Schitoviridae› Waedenswilvirus› Erwinia_phage_vB_EamP-S6

TaxID: 1051675

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-162
PDB
Domain cluster: rep: OQ992562.1__WNV50240.1__X__00201__D5-90_205-235
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2xppA00 1.20.930.10 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.61 25.0 2.71e-01 90.6% 41.6%
1qv9A02 6.10.140.120 Special › Helix non-globular › Helix Hairpins › 0.61 27.0 3.32e-01 86.2% 64.1%
1gaxA05 1.10.287.380 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain 0.59 27.0 4.01e-01 80.5% 97.3%
1urfA00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.57 26.0 3.51e-01 79.9% 82.7%
3w1oA00 3.40.1760.20 Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical protein yfbM fold › 0.55 39.0 4.41e-01 99.4% 99.1%
1blwC00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.55 40.0 4.26e-01 75.5% 95.0%
3msyA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.54 35.0 4.04e-01 91.2% 91.0%
1uurA01 1.20.58.240 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1 0.52 31.0 3.71e-01 91.8% 85.5%
3iu5A00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.52 36.0 4.11e-01 87.4% 96.5%
2dkwA00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.52 38.0 4.15e-01 89.3% 91.6%
1u5pA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 28.0 3.40e-01 91.2% 78.7%
7zxkC01 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.51 38.0 3.94e-01 76.7% 98.0%
4dyqA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.50 29.0 3.57e-01 83.0% 87.4%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4039238 192.6.1.1 ↗ alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain › ATP-synt_DE 0.71 26.0 4.39e-01 89.3% 98.2%
5060491 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.60 28.0 3.19e-01 86.2% 57.5%
3283906 618.1.1.3 ↗ a+b complex topology › DNA mimic protein DMP12-like › DNA mimic protein DMP12-related › DNA mimic protein DMP12-related › DUF7691 0.58 50.0 5.16e-01 100.0% 98.0%
4574972 192.7.1.0 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.58 22.0 3.57e-01 89.3% 93.3%
4025008 650.1.1.0 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain 0.56 30.0 3.88e-01 98.7% 88.4%
1019380 604.5.1.2 ↗ alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU 0.54 29.0 3.46e-01 90.6% 75.9%
3269429 603.2.1.2 ↗ alpha bundles › STAT-like › STAT › STAT › Dict-STAT-coil 0.53 31.0 3.65e-01 91.8% 81.7%
3955360 2003.1.5.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.52 36.0 3.03e-01 98.7% 40.0%
3900921 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.51 28.0 3.24e-01 90.6% 70.8%