HSP70

Euk-Vir

Carnation_yellow_fleck_virus

HSP70__YP_008858533__Carnation_yellow_fleck_virus__940280

Identity

85.8 mean pLDDT

Orthornavirae› Kitrinoviricota› Alsuviricetes› Martellivirales› Closteroviridae› Carnation_yellow_fleck_virus

TaxID: 940280

View cluster (42 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 388-496

PDB

Domain cluster: rep: heat_shock_protein_70_homolog__YP_009241368__Grapevine_leafroll-associated_virus_13__1815581__D381-469

D2 high residues 517-595

PDB

Domain cluster: representative

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1k32A03	3.30.750.44	Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA ›	0.63	44.0	4.55e-01	73.4%	97.2%
1j1jA02	1.20.58.200	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2	0.55	36.0	3.50e-01	96.2%	61.2%
1xeqB00	1.10.287.10	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding	0.54	36.0	3.58e-01	94.9%	64.7%
1gq2A02	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.54	43.0	2.96e-01	88.6%	70.0%
2cqnA00	1.10.10.440	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain	0.52	30.0	3.07e-01	84.8%	55.8%
2w9mB01	1.10.150.110	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like	0.52	38.0	3.72e-01	79.7%	94.2%
3hx0K01	1.10.150.110	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like	0.51	35.0	3.54e-01	74.7%	91.6%
2f48A03	1.10.10.480	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Phosphofructokinase; domain 3	0.51	31.0	3.16e-01	96.2%	64.0%
6h5hA00	1.10.150.110	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like	0.50	36.0	3.76e-01	77.2%	98.6%
2pjrA03	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.50	30.0	2.73e-01	87.3%	44.3%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3628331	148.1.1.7 ↗	alpha arrays › Histone-like › Histone-related › Histone › TAF	0.71	35.0	3.48e-01	92.4%	43.5%
3629156	633.1.1.0 ↗	alpha bundles › Bromodomain-like › Bromodomain › Bromodomain	0.65	47.0	4.08e-01	77.2%	80.0%
3512663	102.1.1.30 ↗	alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_8	0.57	43.0	4.19e-01	84.8%	90.0%
5032891	130.1.1.0 ↗	alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif	0.56	40.0	4.23e-01	79.7%	84.3%
4033987	102.1.1.30 ↗	alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_8	0.53	36.0	3.66e-01	72.2%	91.3%
3476392	102.1.1.30 ↗	alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_8	0.53	40.0	3.84e-01	84.8%	90.5%
3738833	102.1.1.30 ↗	alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_8	0.52	35.0	3.74e-01	70.9%	95.4%
4202567	109.4.1.171 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › U3snoRNP10	0.51	38.0	2.16e-01	81.0%	16.4%
4014137	102.1.1.0 ↗	alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like	0.51	38.0	3.95e-01	82.3%	98.6%

D3 medium residues 1-35_141-192_359-379

PDB

Domain cluster: rep: heat-shock_protein__NP_619695__Lettuce_infectious_yellows_virus__31713__D2-172

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00012.27 best	HSP70	26.5	2.70e-06	70.4%	8.2%

D4 medium residues 36-140

PDB

Domain cluster: rep: Hsp70h__YP_009162624__Tobacco_virus_1__1692045__D36-122

D5 medium residues 193-230_312-358

PDB

Domain cluster: rep: NC_005856.1__YP_006576.1__P1_gp110__00106__D281-382

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00012.27 best	HSP70	25.4	5.70e-06	48.2%	5.3%

D6 medium residues 231-311

PDB

Domain cluster: rep: p67__YP_003075968__Carrot_yellow_leaf_virus__656190__D231-307