←Back to structures

HSP70h

Euk-Vir

Beet_pseudoyellows_virus

HSP70h__NP_940788__Beet_pseudoyellows_virus__72750

Identity

Accession:: NP_940788 ↗
Protein ID:: HSP70h
Kingdom:: euk

Quality

86.4 mean pLDDT

Taxonomy

Orthornavirae› Kitrinoviricota› Alsuviricetes› Martellivirales› Closteroviridae› Crinivirus› Beet_pseudoyellows_virus

TaxID: 72750

Cluster

View cluster (42 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 377-475

PDB

Domain cluster: rep: heat_shock_protein_70_homolog__YP_009241368__Grapevine_leafroll-associated_virus_13__1815581__D381-469

D2 high residues 492-549

PDB

Domain cluster: rep: heat_shock_protein_homologue__YP_054417__Potato_yellow_vein_virus__103881__D496-549

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1zymA02	1.10.274.10	Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › PtsI, HPr-binding domain	0.58	46.0	3.75e-01	93.1%	92.9%
4heoA00	1.10.8.10	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain	0.58	47.0	4.86e-01	98.3%	98.2%
2rg4A01	2.60.120.620	Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain	0.56	45.0	3.13e-01	87.9%	60.8%
1s8nA02	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.56	45.0	4.56e-01	94.8%	100.0%
1h72C02	3.30.70.890	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain	0.54	38.0	3.00e-01	77.6%	88.9%
2pmrA00	1.20.1270.90	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like	0.54	39.0	3.70e-01	84.5%	98.7%
3bbzA00	1.10.8.10	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain	0.53	39.0	4.21e-01	84.5%	97.9%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3645152	605.1.1.0 ↗	alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase	0.69	54.0	5.08e-01	84.5%	97.1%
4218986	601.3.1.6 ↗	alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › Mitofilin	0.64	49.0	3.65e-01	82.8%	66.7%
5052298	3317.1.1.0 ↗	alpha arrays › KorB C-terminal domain-like › KorB C-terminal domain › KorB C-terminal domain	0.64	48.0	4.95e-01	87.9%	87.3%
3501241	4193.1.1.1 ↗	alpha arrays › RUN domain › RUN domain › RUN domain › RUN	0.63	53.0	3.87e-01	100.0%	53.1%
4968828	206.1.1.0 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase	0.56	47.0	3.29e-01	98.3%	70.0%
185069	632.3.1.2 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain › Paramyx_P_V_C	0.53	39.0	4.21e-01	84.5%	97.9%
4932213	610.3.1.1 ↗	alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey	0.51	37.0	2.80e-01	82.8%	72.4%
3172162	632.7.1.1 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70	0.50	39.0	3.42e-01	98.3%	75.5%

D3 medium residues 1-143

PDB

Domain cluster: rep: heat-shock_protein__NP_619695__Lettuce_infectious_yellows_virus__31713__D2-172

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00012.27 best	HSP70	21.4	9.20e-05	95.1%	20.0%

D4 medium residues 144-223_313-376

PDB

Domain cluster: rep: heat_shock_protein_70__YP_293699__Tomato_chlorosis_virus__67754__D171-224_298-370

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00012.27 best	HSP70	42.7	3.40e-11	57.6%	13.5%

D5 medium residues 224-312

PDB

Domain cluster: rep: p67__YP_003075968__Carrot_yellow_leaf_virus__656190__D231-307