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HSP70h

Euk-Vir

Blackcurrant_leafroll-associated_virus_1

HSP70h__YP_009553248__Blackcurrant_leafroll-associated_virus_1__2292426

Identity

Accession:
YP_009553248 ↗
Protein ID:
HSP70h
Kingdom:
euk

Quality

84.7 mean pLDDT

Taxonomy

Orthornavirae› Kitrinoviricota› Alsuviricetes› Martellivirales› Closteroviridae› Closterovirus› Blackcurrant_leafroll-associated_virus_1

TaxID: 2292426

Cluster

View cluster (42 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 380-488
PDB
Domain cluster: rep: heat_shock_protein_70_homolog__YP_009241368__Grapevine_leafroll-associated_virus_13__1815581__D381-469
D2 high residues 506-575
PDB
Domain cluster: rep: HSP70h__YP_009553662__Blackcurrant_leafroll-associated_virus_1__2292426__D506-588
D3 medium residues 1-34_123-191_351-376
PDB
Domain cluster: rep: heat-shock_protein__NP_619695__Lettuce_infectious_yellows_virus__31713__D2-172
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00012.27 best HSP70 34.8 8.40e-09 62.8% 9.7%
D4 medium residues 192-233_302-350
PDB
Domain cluster: rep: NC_005856.1__YP_006576.1__P1_gp110__00106__D281-382
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00012.27 best HSP70 32.4 4.30e-08 50.5% 7.2%
D5 medium residues 234-301
PDB
Domain cluster: rep: p67__YP_003075968__Carrot_yellow_leaf_virus__656190__D231-307
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3d2fA04 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.83 75.0 7.02e-01 100.0% 96.4%
4gniA04 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.83 75.0 6.91e-01 100.0% 96.5%
6rzqA04 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.83 75.0 6.93e-01 100.0% 96.5%
5adxJ01 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.63 53.0 4.87e-01 98.5% 98.9%
2retA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.61 43.0 4.06e-01 75.0% 90.5%
5optn00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 38.0 3.52e-01 88.2% 50.5%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.56 41.0 3.12e-01 98.5% 32.3%
2o18A00 3.10.520.10 Alpha Beta › Roll › T-fold › ApbE-like domains 0.56 42.0 2.75e-01 80.9% 68.1%
3ezjA02 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.56 39.0 3.92e-01 100.0% 73.5%
1vq0A02 3.90.1280.10 Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like 0.56 40.0 4.21e-01 85.3% 93.0%
4ig1A00 3.10.520.10 Alpha Beta › Roll › T-fold › ApbE-like domains 0.55 42.0 2.71e-01 82.4% 68.3%
4bwxA03 1.10.287.3700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.53 43.0 4.15e-01 94.1% 98.8%
4ivkA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.53 44.0 2.79e-01 98.5% 70.5%
1jqgA01 3.30.70.340 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Metallocarboxypeptidase-like 0.53 36.0 3.31e-01 94.1% 53.8%
5hn3A00 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.52 42.0 2.78e-01 91.2% 90.4%
4erdA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.52 41.0 3.64e-01 91.2% 83.3%
2w01B00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.52 41.0 3.05e-01 91.2% 59.4%
1kafA00 3.90.1150.20 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription regulator MotA, C-terminal domain 0.52 37.0 3.23e-01 76.5% 93.5%
1x4dA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.52 41.0 3.69e-01 91.2% 80.4%
2zihC00 1.10.3630.10 Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like 0.51 43.0 2.94e-01 100.0% 89.2%
1xexB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 44.0 3.39e-01 100.0% 43.5%
2fgeA01 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.50 42.0 2.97e-01 100.0% 79.3%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4627505 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.81 73.0 5.27e-01 100.0% 39.5%
3520970 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.75 66.0 4.78e-01 100.0% 37.9%
3783691 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.72 63.0 4.50e-01 100.0% 39.0%
3993677 823.1.1.0 ↗ a+b two layers › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W, gpW 0.59 44.0 4.40e-01 97.1% 78.6%
3637321 859.1.1.3 ↗ a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › ATG101 0.59 46.0 3.50e-01 86.8% 64.2%
3968677 872.9.1.2 ↗ a+b two layers › Dodecin subunit-like › Flagella basal-body protein flgT N-terminal domain › Flagella basal-body protein flgT N-terminal domain › PF29988 0.58 39.0 3.72e-01 72.1% 81.2%
5005295 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.57 41.0 3.32e-01 75.0% 89.2%
4978228 305.2.1.0 ↗ a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) 0.56 40.0 4.14e-01 100.0% 78.5%
3900298 101.1.21.1 ↗ alpha arrays › HTH › HTH › HTH in T7 RNA polymerase › RPOL_N 0.55 45.0 3.20e-01 100.0% 65.9%
3971738 304.8.1.102 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_3, ACT_7 0.53 37.0 3.11e-01 100.0% 39.8%
3252239 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.52 38.0 3.74e-01 100.0% 72.0%
3885545 327.11.2.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.52 35.0 3.60e-01 89.7% 72.3%
5031215 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.52 29.0 3.14e-01 79.4% 65.5%
3644266 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 34.0 3.12e-01 72.1% 85.0%
4926994 101.1.2.150 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.50 34.0 3.06e-01 72.1% 78.8%