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HSP90
Euk-VirBlackcurrant_leafroll-associated_virus_1
HSP90__YP_009553663__Blackcurrant_leafroll-associated_virus_1__2292426
Identity
- Accession:
- YP_009553663 ↗
- Protein ID:
- HSP90
- Kingdom:
- euk
Quality
70.6
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Alsuviricetes›
Martellivirales›
Closteroviridae›
Closterovirus›
Blackcurrant_leafroll-associated_virus_1
TaxID: 2292426
Cluster
View cluster (11 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 11-101
Domain cluster:
rep: p54__YP_003075969__Carrot_yellow_leaf_virus__656190__D13-92
D2
medium
residues 182-305
D3
medium
residues 306-324_435-490
D4
medium
residues 325-434
Domain cluster:
rep: 59_kDa_protein__YP_009112886__Persimmon_virus_B__1493829__D326-414
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03225.20 best | Viral_Hsp90 | 64.1 | 1.30e-17 | 98.2% | 20.7% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yskA00 | 1.10.490.110 | Mainly Alpha › Orthogonal Bundle › Globin-like › Uncharacterized conserved protein DUF2267 | 0.69 | 48.0 | 4.41e-01 | 71.8% | 82.6% |
| 4ixjA01 | 3.30.1300.80 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.65 | 34.0 | 4.03e-01 | 89.1% | 72.7% |
| 6ynwH01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.62 | 27.0 | 3.23e-01 | 87.3% | 60.8% |
| 8ctsB01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 38.0 | 4.20e-01 | 85.5% | 81.6% |
| 1jogA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.55 | 33.0 | 3.12e-01 | 88.2% | 46.7% |
| 1jfaB00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.55 | 40.0 | 2.89e-01 | 76.4% | 52.3% |
| 3j7aY00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 41.0 | 3.71e-01 | 85.5% | 78.6% |
| 2f76X00 | 1.10.150.490 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Retroviral GAG p10 protein | 0.51 | 35.0 | 3.69e-01 | 70.0% | 89.0% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3385809 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.58 | 39.0 | 4.00e-01 | 82.7% | 71.4% |
| 3583209 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.58 | 39.0 | 3.64e-01 | 82.7% | 54.3% |
| 3519635 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.53 | 30.0 | 3.02e-01 | 95.5% | 53.6% |
| 4140340 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.52 | 28.0 | 2.58e-01 | 93.6% | 38.0% |
| 4029803 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.51 | 29.0 | 2.74e-01 | 88.2% | 46.2% |
| 4281419 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.50 | 28.0 | 2.67e-01 | 93.6% | 43.5% |