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HSP90h

Euk-Vir

Malus_domestica_virus_A

HSP90h__YP_010087862__Malus_domestica_virus_A__2664236

Identity

Accession:
YP_010087862 ↗
Protein ID:
HSP90h
Kingdom:
euk

Quality

76.8 mean pLDDT

Taxonomy

Orthornavirae› Kitrinoviricota› Alsuviricetes› Martellivirales› Closteroviridae› Velarivirus› Malus_domestica_virus_A

TaxID: 2664236

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-129
PDB
D2 high residues 198-326
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03225.20 best Viral_Hsp90 28.8 6.80e-07 97.7% 21.9%
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1zbtA01 6.10.140.1950 Special › Helix non-globular › Helix Hairpins › 0.56 23.0 2.82e-01 73.6% 55.4%
3hd6A00 1.10.3430.10 Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains 0.55 46.0 3.28e-01 90.7% 55.1%
7c1iA01 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.55 32.0 3.52e-01 86.8% 71.0%
4irlB02 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.54 31.0 3.50e-01 77.5% 75.3%
3cucA00 1.10.3290.10 Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain 0.52 39.0 3.17e-01 79.8% 61.1%
3lqhA02 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.52 36.0 3.84e-01 76.7% 85.8%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3288129 5050.1.1.9 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.52 36.0 3.26e-01 71.3% 91.5%
3655623 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.52 29.0 3.10e-01 89.9% 59.1%
4017157 150.1.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.51 44.0 4.08e-01 95.3% 92.1%
3460830 604.16.1.3 ↗ alpha bundles › Spectrin repeat-like › Hypothetical membrane protein Ta0354, soluble domain › Hypothetical membrane protein Ta0354, soluble domain › Vwaint 0.50 30.0 3.32e-01 89.1% 72.4%
D3 high residues 331-481
PDB
Domain cluster: rep: Hsp90__YP_010086803__Pistachio_ampelovirus_A__2093224__D326-483
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03225.20 best Viral_Hsp90 92.9 2.50e-26 100.0% 26.4%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1a31A03 3.90.15.10 Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 0.56 36.0 3.69e-01 72.8% 65.3%
1aroP05 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.56 36.0 3.29e-01 87.4% 46.4%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.54 27.0 3.31e-01 70.9% 76.7%
2mh9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 33.0 3.55e-01 90.1% 76.4%
1kyzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 28.0 3.26e-01 93.4% 76.7%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3587631 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.56 38.0 3.98e-01 94.0% 73.6%
3326456 2484.1.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.55 50.0 3.72e-01 100.0% 65.1%
3704631 2484.1.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.54 49.0 3.68e-01 99.3% 62.1%
4647653 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.53 48.0 3.45e-01 97.4% 93.9%
3828165 2484.1.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.53 48.0 4.14e-01 100.0% 85.0%
3883105 3226.1.1.1 ↗ alpha complex topology › Uracil Transporter UraA › Uracil Transporter UraA › Uracil Transporter UraA › Xan_ur_permease 0.53 45.0 3.19e-01 93.4% 88.6%
3380586 2484.1.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.53 48.0 3.62e-01 98.7% 88.6%
4028937 109.4.1.1255 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N, Cnd1 0.53 31.0 1.99e-01 92.7% 11.4%
4199985 2484.1.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.52 46.0 3.68e-01 97.4% 87.4%
4539356 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.51 45.0 3.38e-01 96.0% 94.6%
4970053 3896.1.1.0 ↗ alpha duplicates or obligate multimers › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase 0.51 34.0 3.02e-01 88.7% 43.8%
3409778 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.51 28.0 3.05e-01 77.5% 62.3%
3263845 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.51 45.0 3.12e-01 97.4% 61.6%
3255532 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.50 44.0 3.96e-01 94.0% 82.4%
D4 medium residues 130-184
PDB