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HSP_70h

Euk-Vir

Rose_leaf_rosette-associated_virus

HSP_70h__YP_009058932__Rose_leaf_rosette-associated_virus__1543207

Identity

Accession:
YP_009058932 ↗
Protein ID:
HSP_70h
Kingdom:
euk

Quality

79.1 mean pLDDT

Taxonomy

Orthornavirae› Kitrinoviricota› Alsuviricetes› Martellivirales› Closteroviridae› Closterovirus› Rose_leaf_rosette-associated_virus

TaxID: 1543207

Cluster

View cluster (42 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 409-491
PDB
Domain cluster: rep: heat_shock_protein_70_homolog__YP_009241368__Grapevine_leafroll-associated_virus_13__1815581__D381-469
D2 high residues 513-595
PDB
D3 medium residues 1-37_123-192_356-376
PDB
Domain cluster: rep: heat-shock_protein__NP_619695__Lettuce_infectious_yellows_virus__31713__D2-172
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00012.27 best HSP70 23.2 2.60e-05 63.3% 10.7%
D4 medium residues 193-234_300-355
PDB
Domain cluster: rep: NC_005856.1__YP_006576.1__P1_gp110__00106__D281-382
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00012.27 best HSP70 31.6 7.60e-08 44.9% 6.8%
D5 medium residues 235-299
PDB
Domain cluster: rep: p67__YP_003075968__Carrot_yellow_leaf_virus__656190__D231-307
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1k8kA04 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.63 52.0 4.81e-01 100.0% 98.9%
2ix2B00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.60 42.0 2.85e-01 73.8% 33.1%
2zpmA00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.57 46.0 4.29e-01 92.3% 94.2%
4mtnA01 3.30.1480.10 Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain 0.57 46.0 4.13e-01 100.0% 63.2%
2z86D02 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.56 45.0 3.08e-01 90.8% 63.8%
3fv6A00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.55 47.0 3.73e-01 100.0% 91.7%
1jqgA01 3.30.70.340 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Metallocarboxypeptidase-like 0.54 39.0 3.53e-01 100.0% 54.9%
3llcA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 40.0 2.75e-01 81.5% 58.2%
1vq0A02 3.90.1280.10 Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like 0.53 38.0 3.97e-01 81.5% 87.7%
2k6vA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 38.0 2.87e-01 78.5% 71.5%
1xexB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 46.0 3.50e-01 100.0% 41.6%
4ivkA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.52 39.0 2.41e-01 80.0% 94.1%
7x0fA01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.52 42.0 3.32e-01 93.8% 79.7%
4aurA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 43.0 2.91e-01 96.9% 31.0%
5cqgA02 3.10.10.20 Alpha Beta › Roll › HIV Type 1 Reverse Transcriptase; Chain A, domain 1 › 0.51 38.0 3.76e-01 81.5% 90.3%
1aihA00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.51 39.0 3.01e-01 92.3% 33.5%
1zcdA00 1.20.1530.10 Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › Na+/H+ antiporter like domain 0.51 44.0 2.76e-01 100.0% 55.3%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 32.0 2.76e-01 81.5% 40.0%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3373074 207.1.1.55 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 0.58 34.0 1.94e-01 73.8% 6.5%
3381794 207.1.1.57 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRRNT_2,LRR_4,LRR_6,LRR_8 0.58 33.0 1.82e-01 72.3% 3.6%
3602420 2008.1.1.15 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › HSDR_N 0.58 41.0 2.74e-01 76.9% 90.9%
3299745 207.1.1.185 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_6 0.57 33.0 1.98e-01 70.8% 9.4%
3305137 3569.1.1.0 ↗ extended segments › Epidermal growth factor receptor transmembrane-juxtamembrane segment-like › Epidermal growth factor receptor transmembrane-juxtamembrane segment › Epidermal growth factor receptor transmembrane-juxtamembrane segment 0.56 33.0 3.39e-01 75.4% 60.9%
4959456 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.55 38.0 2.91e-01 73.8% 52.4%
3810002 101.1.2.111 ↗ alpha arrays › HTH › HTH › winged helix domain › RQC 0.54 37.0 3.15e-01 72.3% 59.1%
4944802 2008.1.1.15 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › HSDR_N 0.53 45.0 3.06e-01 100.0% 28.7%
3781334 7579.1.1.0 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.53 43.0 2.76e-01 92.3% 50.5%
3988732 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.50 34.0 2.88e-01 84.6% 42.6%