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HT_motif_family_protein

Euk-Vir

Flamingopox_virus_FGPVKD09

HT_motif_family_protein__YP_009448066__Flamingopox_virus_FGPVKD09__2059380

Identity

Accession:
YP_009448066 ↗
Protein ID:
HT_motif_family_protein
Kingdom:
euk

Quality

73.3 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Avipoxvirus› Flamingopox_virus_FGPVKD09

TaxID: 2059380

Cluster

View cluster (2 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 16-92
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19240.5 best DUF5890 30.4 4.40e-07 100.0% 98.7%
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1cbfA02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.70 57.0 4.90e-01 100.0% 56.2%
4u7cB04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.68 59.0 5.35e-01 100.0% 89.9%
3mfiA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.67 58.0 5.11e-01 100.0% 94.1%
3h20A01 3.30.1490.240 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain 0.67 49.0 5.20e-01 89.6% 92.4%
1unnC00 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.66 58.0 5.20e-01 100.0% 84.7%
1xffA00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.66 55.0 3.91e-01 100.0% 29.8%
4emeC02 2.30.250.10 Mainly Beta › Roll › Aminopeptidase i, Domain 2 › Aminopeptidase i, Domain 2 0.65 58.0 4.82e-01 100.0% 97.8%
3ffyA00 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.65 50.0 4.53e-01 100.0% 59.8%
1va0B02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.64 50.0 4.32e-01 100.0% 53.2%
6julA02 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.63 53.0 5.01e-01 96.1% 93.8%
1s55A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.63 55.0 4.43e-01 100.0% 92.3%
4msvA01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.62 55.0 4.57e-01 100.0% 94.9%
4lejA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.62 45.0 3.40e-01 100.0% 33.1%
7pupA01 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.62 46.0 3.46e-01 100.0% 29.8%
3nutB02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.61 50.0 4.23e-01 100.0% 53.9%
4ll1C02 2.60.40.640 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 43.0 3.53e-01 75.3% 82.9%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.60 50.0 5.01e-01 89.6% 88.3%
2vfrA02 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.60 53.0 4.48e-01 100.0% 75.4%
4ca1B02 2.60.210.10 Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 0.60 51.0 4.38e-01 100.0% 90.2%
2qejD01 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.59 51.0 4.50e-01 100.0% 77.1%
2bvfA02 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.59 52.0 4.28e-01 100.0% 70.9%
1aw7A01 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.57 50.0 4.33e-01 100.0% 74.8%
3d0jA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 42.0 3.58e-01 100.0% 45.7%
1w1oA02 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.56 49.0 4.22e-01 100.0% 79.5%
3e0jB00 3.90.1030.20 Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain 0.56 44.0 3.63e-01 100.0% 46.2%
4h3wA02 2.60.120.1260 Mainly Beta › Sandwich › Jelly Rolls › 0.56 48.0 3.93e-01 100.0% 90.8%
1te5A00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.55 47.0 3.36e-01 100.0% 31.2%
2lxxA00 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.55 45.0 3.60e-01 89.6% 68.4%
6kbyA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.55 43.0 2.85e-01 89.6% 24.6%
1eu3A01 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.54 46.0 4.05e-01 100.0% 82.8%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.54 40.0 3.51e-01 80.5% 65.8%
5jpnB04 2.60.120.1540 Mainly Beta › Sandwich › Jelly Rolls › 0.54 44.0 3.85e-01 92.2% 74.4%
4kncA02 2.60.120.1380 Mainly Beta › Sandwich › Jelly Rolls › C-terminal carbohydrate-binding module 0.53 45.0 4.03e-01 100.0% 89.7%
3ddcB00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.52 43.0 3.63e-01 92.2% 86.5%
2aehA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.52 44.0 4.16e-01 98.7% 93.8%
2b39A10 2.60.120.1540 Mainly Beta › Sandwich › Jelly Rolls › 0.52 45.0 3.98e-01 100.0% 89.7%
4d0qA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 45.0 3.59e-01 100.0% 89.4%
8bs9A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.51 44.0 3.03e-01 100.0% 32.3%
1xdpA02 3.30.1840.10 Alpha Beta › 2-Layer Sandwich › polyphosphate kinase like › Polyphosphate kinase middle domain 0.51 41.0 3.03e-01 87.0% 91.6%
7vjvA01 2.60.120.590 Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like 0.50 43.0 3.26e-01 100.0% 42.5%
5awwY00 1.10.3370.10 Mainly Alpha › Orthogonal Bundle › Preprotein translocase SecY subunit › SecY subunit domain 0.50 39.0 2.53e-01 88.3% 78.1%
3nziA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.50 37.0 3.39e-01 92.2% 58.5%
3f8uB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 43.0 3.76e-01 100.0% 88.1%
2r41A00 3.10.450.150 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein 0.50 34.0 3.17e-01 71.4% 79.6%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4929079 821.1.1.15 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF7508 0.70 52.0 4.90e-01 100.0% 64.9%
4971386 210.1.3.0 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases 0.70 61.0 4.15e-01 100.0% 30.9%
3411558 302.1.1.1 ↗ a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.70 61.0 5.07e-01 100.0% 78.6%
3213931 302.1.1.1 ↗ a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.68 60.0 5.09e-01 100.0% 86.2%
4946875 862.1.1.1 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S 0.66 53.0 3.69e-01 94.8% 26.0%
3180837 1.1.5.30 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_oxase_2 0.65 47.0 3.34e-01 76.6% 37.6%
5081419 210.1.3.3 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.65 58.0 3.98e-01 100.0% 31.1%
5011866 210.1.3.3 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.65 56.0 4.05e-01 100.0% 36.2%
2006900 302.4.1.0 ↗ a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit 0.64 55.0 5.08e-01 100.0% 90.4%
4398420 1137.1.1.0 ↗ a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain 0.63 51.0 4.49e-01 100.0% 59.2%
3724417 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.63 55.0 4.48e-01 100.0% 79.3%
3611020 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.62 54.0 4.05e-01 100.0% 39.5%
4385740 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.62 53.0 4.88e-01 100.0% 91.4%
3958897 4187.2.1.0 ↗ a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 0.61 46.0 4.07e-01 100.0% 53.3%
3965213 210.1.3.3 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.61 53.0 3.66e-01 100.0% 28.4%
5027271 210.1.3.3 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.61 52.0 3.74e-01 100.0% 32.8%
4991572 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.60 52.0 3.76e-01 100.0% 34.2%
3321071 101.1.2.115 ↗ alpha arrays › HTH › HTH › winged helix domain › CDC27 0.60 44.0 3.64e-01 100.0% 42.9%
5011747 302.4.1.0 ↗ a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit 0.60 52.0 5.02e-01 100.0% 91.1%
3692317 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.60 47.0 3.00e-01 85.7% 18.2%
3789334 302.4.1.0 ↗ a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit 0.60 53.0 4.79e-01 100.0% 96.2%
4009311 4187.2.1.0 ↗ a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 0.60 46.0 4.88e-01 96.1% 100.0%
5066749 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.59 52.0 3.69e-01 100.0% 31.4%
4011073 217.1.1.0 ↗ a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain 0.59 52.0 4.28e-01 100.0% 59.3%
3988217 241.12.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › YktB/PF0168-like › YktB/PF0168-like 0.58 46.0 3.46e-01 100.0% 33.5%
3612075 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.58 50.0 3.75e-01 100.0% 36.2%
3488019 221.1.1.6 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.58 47.0 3.90e-01 90.9% 88.2%
3453549 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.58 50.0 4.46e-01 100.0% 87.0%
3477290 1.1.5.9 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx,PNP_phzG_C 0.58 45.0 3.23e-01 84.4% 33.5%
3823449 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.57 50.0 3.43e-01 100.0% 35.2%
4023494 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.57 48.0 4.28e-01 100.0% 84.2%
3927107 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.56 48.0 4.20e-01 100.0% 80.8%
3404828 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.56 43.0 3.30e-01 84.4% 40.0%
3483062 221.1.1.116 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_6 0.56 45.0 3.94e-01 89.6% 95.8%
3929801 221.1.1.6 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.56 43.0 4.13e-01 88.3% 96.8%
3878211 881.1.1.22 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › Rab3-GAP_cat_C 0.56 49.0 3.37e-01 98.7% 50.6%
3606053 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.56 47.0 4.13e-01 100.0% 89.0%
3218957 221.1.1.6 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.55 44.0 3.96e-01 90.9% 97.4%
3691574 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.54 44.0 4.47e-01 92.2% 100.0%
3920384 221.1.1.6 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.54 47.0 3.88e-01 100.0% 72.4%
3702708 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.54 46.0 4.37e-01 100.0% 88.4%
3497068 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 46.0 4.20e-01 100.0% 71.4%
3573560 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.53 46.0 4.28e-01 100.0% 85.0%
3405824 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.53 46.0 4.05e-01 100.0% 85.8%
3704468 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.53 45.0 4.08e-01 100.0% 91.8%
3446425 11.1.1.558 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF6598 0.53 41.0 3.60e-01 90.9% 55.0%
3940885 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.53 44.0 4.18e-01 100.0% 87.0%
3405565 221.1.1.6 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.52 45.0 4.24e-01 100.0% 89.5%
3696767 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.52 40.0 2.61e-01 85.7% 25.2%
3583658 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.52 44.0 4.01e-01 100.0% 77.3%
3886404 221.1.1.6 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.52 43.0 3.83e-01 100.0% 68.8%
3867707 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.52 45.0 4.02e-01 100.0% 67.0%
3898135 10.2.1.5 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide 0.52 44.0 3.42e-01 100.0% 77.4%
3926171 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 44.0 3.87e-01 100.0% 80.8%
4011483 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 43.0 3.87e-01 100.0% 80.0%
4544770 2492.1.1.1 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › dCMP_cyt_deam_1 0.51 36.0 3.07e-01 76.6% 63.6%
3582714 221.1.1.6 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.51 44.0 4.13e-01 100.0% 86.3%
3640265 11.2.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PI3K_C2 0.50 39.0 2.71e-01 87.0% 30.7%