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Hel

Euk-Vir

Rat_coronavirus_Parker

Hel__YP_009924379__Rat_coronavirus_Parker__502102

Identity

Accession:
YP_009924379 ↗
Protein ID:
Hel
Kingdom:
euk

Quality

91.3 mean pLDDT

Taxonomy

Orthornavirae› Pisuviricota› Pisoniviricetes› Nidovirales› Coronaviridae› Betacoronavirus› Rat_coronavirus_Parker

TaxID: 502102

Cluster

View cluster (23 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-127
PDB
Domain cluster: rep: NSP13__YP_001941186__Turkey_coronavirus__11152__D2-47_82-145
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF20632.3 best CoV_NSP13_ZBD 157.9 1.00e-46 73.6% 98.9%
PF20633.3 CoV_NSP13_stalk 43.6 4.30e-11 24.8% 64.6%
D2 high residues 147-227
PDB
Domain cluster: rep: nsp13__YP_009755921__Canada_goose_coronavirus__2569586__D146-226
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF20631.4 best CoV_NSP13_1B 132.5 7.30e-39 100.0% 98.8%
D3 high residues 278-441
PDB
Domain cluster: rep: NC_074643__YP_010772404.1__QIT40-gp03__00003__D149-351
Pfam (4)
AccessionNameScoreE-valueQ covHMM cov
PF13604.13 best AAA_30 33.6 4.70e-08 80.5% 56.5%
PF13245.13 AAA_19 31.9 1.90e-07 79.3% 85.8%
PF05127.22 NAT10_TcmA_helicase 27.5 3.80e-06 73.2% 59.9%
PF13086.13 AAA_11 30.7 4.00e-07 51.2% 30.0%
D4 high residues 462-588
PDB
Domain cluster: rep: IMGVR_UViG_3300009509_000914-3300009509-Ga0123573_1001185116__D490-580_655-727
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF13087.13 best AAA_12 46.5 4.50e-12 92.1% 60.0%
PF13538.13 UvrD_C_2 30.1 4.70e-07 36.2% 82.7%