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IAP-2
Euk-VirSpodoptera_exempta_nucleopolyhedrovirus
IAP-2__YP_010086502__Spodoptera_exempta_nucleopolyhedrovirus__1242863
Identity
- Accession:
- YP_010086502 ↗
- Protein ID:
- IAP-2
- Kingdom:
- euk
Quality
78.5
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Alphabaculovirus›
Spodoptera_exempta_nucleopolyhedrovirus
TaxID: 1242863
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 205-252
Domain cluster:
rep: IAP_c__YP_009116756__Tipula_oleracea_nudivirus__1546257__D239-297
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13920.13 best | zf-C3HC4_3 | 48.6 | 7.70e-13 | 95.8% | 93.9% |
D2
medium
residues 14-75
Domain cluster:
rep: alkaline_exonuclease__YP_010086987__Cryptophlebia_peltastica_nucleopolyhedrovirus__2304025__D258-315
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3siqA00 | 1.10.1170.10 | Mainly Alpha › Orthogonal Bundle › Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A › Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A | 0.74 | 65.0 | 5.52e-01 | 98.4% | 89.3% |
| 2cs0A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.68 | 46.0 | 4.07e-01 | 71.0% | 88.4% |
| 4qjiB00 | 3.40.50.10300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like | 0.58 | 41.0 | 2.91e-01 | 77.4% | 87.0% |
| 4fvmA07 | 1.20.1280.310 | Mainly Alpha › Up-down Bundle › Monooxygenase › B family DNA polymerase, thumb domain, four helix bundle | 0.58 | 34.0 | 3.43e-01 | 71.0% | 56.9% |
| 3fwlA02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.55 | 46.0 | 2.89e-01 | 100.0% | 31.7% |
| 3p2mA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 44.0 | 2.86e-01 | 88.7% | 38.8% |
| 4h8aB01 | 1.10.1530.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel | 0.54 | 40.0 | 4.13e-01 | 82.3% | 88.3% |
| 1yu0A02 | 2.80.20.10 | Mainly Beta › Trefoil › Tail fiber receptor-binding protein › Tail fiber receptor-binding protein | 0.50 | 37.0 | 2.82e-01 | 79.0% | 39.0% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 154260 | 381.1.1.1 ↗ | few secondary structure elements › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › BIR | 0.77 | 70.0 | 5.75e-01 | 100.0% | 74.3% |
| 3938555 | 381.1.1.3 ↗ | few secondary structure elements › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › zf-C3HC | 0.73 | 61.0 | 5.44e-01 | 93.5% | 95.6% |
| 3733582 | 381.1.1.3 ↗ | few secondary structure elements › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › zf-C3HC | 0.73 | 61.0 | 5.30e-01 | 93.5% | 88.4% |
| 3863964 | 381.1.1.3 ↗ | few secondary structure elements › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › zf-C3HC | 0.72 | 60.0 | 5.24e-01 | 93.5% | 89.5% |
| 3696924 | 381.1.1.2 ↗ | few secondary structure elements › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › Rsm1 | 0.72 | 60.0 | 4.72e-01 | 93.5% | 60.9% |
| 3255526 | 381.1.1.3 ↗ | few secondary structure elements › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › zf-C3HC | 0.72 | 60.0 | 5.31e-01 | 93.5% | 95.6% |
| 3293545 | 381.1.1.3 ↗ | few secondary structure elements › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › zf-C3HC | 0.71 | 60.0 | 5.20e-01 | 93.5% | 89.5% |
| 4499664 | 381.1.1.1 ↗ | few secondary structure elements › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › BIR | 0.71 | 62.0 | 5.83e-01 | 98.4% | 96.0% |
| 3220527 | 381.1.1.1 ↗ | few secondary structure elements › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › BIR | 0.70 | 62.0 | 4.91e-01 | 100.0% | 53.1% |
| 4024808 | 381.1.1.3 ↗ | few secondary structure elements › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › zf-C3HC | 0.70 | 59.0 | 5.42e-01 | 93.5% | 93.8% |
| 3903603 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.68 | 45.0 | 4.27e-01 | 74.2% | 56.0% |
| 3309853 | 381.1.1.3 ↗ | few secondary structure elements › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › zf-C3HC | 0.68 | 55.0 | 5.08e-01 | 93.5% | 100.0% |
| 3936249 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.66 | 40.0 | 4.58e-01 | 83.9% | 92.5% |
| 3171946 | 381.1.1.0 ↗ | few secondary structure elements › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat | 0.66 | 54.0 | 4.70e-01 | 93.5% | 77.8% |
| 3874674 | 214.1.1.7 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2_1 | 0.65 | 46.0 | 3.74e-01 | 75.8% | 84.0% |
| 3485485 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.65 | 45.0 | 3.74e-01 | 74.2% | 80.0% |
| 3528458 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.59 | 44.0 | 3.85e-01 | 83.9% | 59.0% |
| 4971098 | 140.1.1.0 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.58 | 50.0 | 3.54e-01 | 95.2% | 95.7% |
| 3769735 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.58 | 44.0 | 3.79e-01 | 83.9% | 59.0% |
| 3220397 | 376.1.6.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR_1 | 0.56 | 42.0 | 4.21e-01 | 100.0% | 80.0% |
| 3679540 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.56 | 41.0 | 2.58e-01 | 80.6% | 29.6% |
| 3246565 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.56 | 47.0 | 3.64e-01 | 100.0% | 90.3% |
| 3406704 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.53 | 36.0 | 3.89e-01 | 90.3% | 88.0% |
| 4002388 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.52 | 38.0 | 3.99e-01 | 90.3% | 90.9% |
| 3228878 | 386.1.1.18 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_jaz | 0.52 | 42.0 | 4.38e-01 | 98.4% | 100.0% |
D3
medium
residues 88-159
Domain cluster:
rep: iap-3__YP_008378255__Hemileuca_sp._nucleopolyhedrovirus__1367203__D5-88
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00653.28 best | BIR | 50.9 | 2.50e-13 | 94.4% | 97.1% |