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IAP-3
Euk-VirOperophtera_brumata_nucleopolyhedrovirus
IAP-3__YP_009552586__Operophtera_brumata_nucleopolyhedrovirus__1046267
Identity
- Accession:
- YP_009552586 ↗
- Protein ID:
- IAP-3
- Kingdom:
- euk
Quality
86.2
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Alphabaculovirus›
Operophtera_brumata_nucleopolyhedrovirus
TaxID: 1046267
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-63
Domain cluster:
rep: alkaline_exonuclease__YP_010086987__Cryptophlebia_peltastica_nucleopolyhedrovirus__2304025__D258-315
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00653.28 best | BIR | 33.3 | 8.00e-08 | 94.0% | 84.3% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2poiA00 | 1.10.1170.10 | Mainly Alpha › Orthogonal Bundle › Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A › Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A | 0.82 | 73.0 | 6.28e-01 | 100.0% | 76.9% |
| 1i3oF00 | 1.10.1170.10 | Mainly Alpha › Orthogonal Bundle › Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A › Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A | 0.79 | 71.0 | 5.72e-01 | 100.0% | 54.8% |
| 6wm6A01 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.59 | 40.0 | 2.63e-01 | 72.0% | 64.5% |
| 2bcqA04 | 3.30.210.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 3 › DNA polymerase, thumb domain | 0.59 | 40.0 | 3.76e-01 | 74.0% | 79.1% |
| 1go3E01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 43.0 | 3.73e-01 | 88.0% | 85.1% |
| 1l5jA02 | 3.20.19.10 | Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 | 0.58 | 42.0 | 2.89e-01 | 80.0% | 79.5% |
| 2w9mA04 | 3.30.210.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 3 › DNA polymerase, thumb domain | 0.57 | 40.0 | 4.01e-01 | 78.0% | 85.5% |
| 2aklA01 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.52 | 36.0 | 3.74e-01 | 80.0% | 86.0% |
| 2vugA03 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.51 | 38.0 | 3.20e-01 | 88.0% | 89.2% |
| 1rm6A05 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.51 | 34.0 | 2.50e-01 | 74.0% | 27.2% |
| 2dk7A00 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.50 | 35.0 | 3.17e-01 | 80.0% | 50.7% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3931141 | 381.1.1.0 ↗ | few secondary structure elements › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat | 0.72 | 65.0 | 6.17e-01 | 100.0% | 93.1% |
| 3559152 | 386.1.1.299 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF30478 | 0.70 | 49.0 | 4.92e-01 | 76.0% | 78.0% |
| 3317170 | 386.1.1.4 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED | 0.67 | 47.0 | 4.92e-01 | 76.0% | 88.9% |
| 3603624 | 2008.1.1.70 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_BsaWI | 0.62 | 45.0 | 3.11e-01 | 86.0% | 75.5% |
| 3910066 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.61 | 45.0 | 4.01e-01 | 84.0% | 78.8% |
| 3759995 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.61 | 45.0 | 2.89e-01 | 84.0% | 22.3% |
| 4065558 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.60 | 42.0 | 3.12e-01 | 78.0% | 34.3% |
| 3274789 | 376.1.6.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain | 0.58 | 35.0 | 3.41e-01 | 100.0% | 50.9% |
| 3971903 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 38.0 | 2.66e-01 | 70.0% | 19.4% |
| 3643546 | 902.1.1.0 ↗ | few secondary structure elements › Amb V allergen › Amb V allergen › Amb V allergen | 0.57 | 37.0 | 3.97e-01 | 70.0% | 97.1% |
| 3786189 | 192.29.1.224 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › PEX18_PEX21_C | 0.56 | 39.0 | 3.62e-01 | 74.0% | 95.4% |
| 3805084 | 376.1.4.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog › IBR | 0.55 | 39.0 | 3.36e-01 | 96.0% | 47.5% |
| 3445108 | 386.1.1.207 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED_2 | 0.54 | 35.0 | 3.52e-01 | 70.0% | 65.5% |
| 3406704 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.53 | 36.0 | 3.63e-01 | 76.0% | 72.0% |
| 4928885 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 36.0 | 3.73e-01 | 82.0% | 84.4% |
D2
high
residues 72-157
Domain cluster:
rep: iap-3__YP_008378255__Hemileuca_sp._nucleopolyhedrovirus__1367203__D5-88
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00653.28 best | BIR | 91.0 | 7.70e-26 | 74.4% | 98.6% |